Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10033082 |
Family | CBM43 |
Protein Properties | Length: 358 Molecular Weight: 40052.9 Isoelectric Point: 5.8602 |
Chromosome | Chromosome/Scaffold: 306 Start: 886816 End: 888679 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 230 | 311 | 1.3e-27 |
WCVLDPNAVTDLTELSKSMDYACGLADCTALEYGGSCNHPSVTGNPSYAFNMYYQVQGQKDWSCDFSGLGMVTYENPSDEKC |
Full Sequence |
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Protein Sequence Length: 358 Download |
MIWKDPPHYF TSSSCCLLTV PWRRKEESRG RGSNVGVNWG TMSTHQLPPE RVVQMLTDNN 60 FAKLKLFGFD DVIMTALLDT HIAVMLAIPN YMLRTMAEDF DSASAWVDQN VTDWCFHGGV 120 NAKLSFIFTY STASIIAINA KRFNQGLLKH VVDGNRTPAR QAGSDDDKIE VYLFSLIDEN 180 ANSVAPGKFE RHRGIFEYDG RPKYELDLKG YGADVGLVAV DGVLYMERKW CVLDPNAVTD 240 LTELSKSMDY ACGLADCTAL EYGGSCNHPS VTGNPSYAFN MYYQVQGQKD WSCDFSGLGM 300 VTYENPSDEK CLFPVMIANG ASSVQGGIKF LLRRIWLVVF MIQIMMFLPI HVNKIGW* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 1.0e-6 | 35 | 124 | 90 | + Glycosyl hydrolases family 17. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-8 | 139 | 207 | 69 | + Glycosyl hydrolases family 17. | ||
pfam07983 | X8 | 2.0e-19 | 229 | 300 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-33 | 229 | 313 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN80308.1 | 2e-24 | 29 | 110 | 23 | 104 | hypothetical protein [Vitis vinifera] |
EMBL | CAN80308.1 | 0 | 139 | 342 | 237 | 436 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002281500.1 | 0 | 139 | 342 | 285 | 484 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002515573.1 | 3e-28 | 13 | 123 | 8 | 118 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002515573.1 | 0 | 140 | 333 | 288 | 477 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.000000000004 | 229 | 314 | 12 | 97 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2cyg_A | 0.0000002 | 35 | 114 | 1 | 80 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 2cyg_A | 0.001 | 139 | 208 | 252 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 4gzj_A | 0.00003 | 139 | 208 | 251 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 4gzj_A | 0.009 | 35 | 113 | 3 | 80 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |