| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10033244 |
| Family | GH17 |
| Protein Properties | Length: 420 Molecular Weight: 44290.7 Isoelectric Point: 8.7921 |
| Chromosome | Chromosome/Scaffold: 488 Start: 203157 End: 204514 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 30 | 346 | 0 |
| IGINYGQIANNLPSPENAVPLIKALGATKVKLYDASPPVLKAFAHSGVEFVVGLGNEFLSKMRDPVNARAWVKSNVQSYLPATNITCITVGNEVLTLNDT SYVADLLPAMQSIHSAVQSLNLQKQVTVTTPHSIAILQSSYPPSAGAFSKDLTGCLTQILNFHAKTGSPFLINAYPYFAYKANPKQVPLDFVLFQPNQGM VDSGSKLHYDNMLFAQIDAVHSALAALGFKDVPVQISETGWPSKGDADEAGATPENAKKYNGNLIKTICQRKGTPMRPSTDLNIFVFALFNENMKPGPTS ERNYGLLKPDGTPSYSI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 420 Download |
| MNKFITFLTH SAPLLLLLFL SAGLVVVDAI GINYGQIANN LPSPENAVPL IKALGATKVK 60 LYDASPPVLK AFAHSGVEFV VGLGNEFLSK MRDPVNARAW VKSNVQSYLP ATNITCITVG 120 NEVLTLNDTS YVADLLPAMQ SIHSAVQSLN LQKQVTVTTP HSIAILQSSY PPSAGAFSKD 180 LTGCLTQILN FHAKTGSPFL INAYPYFAYK ANPKQVPLDF VLFQPNQGMV DSGSKLHYDN 240 MLFAQIDAVH SALAALGFKD VPVQISETGW PSKGDADEAG ATPENAKKYN GNLIKTICQR 300 KGTPMRPSTD LNIFVFALFN ENMKPGPTSE RNYGLLKPDG TPSYSIGIDM PAVSSGGGNK 360 SSPATTSGGG GGGASSGSPQ SAPGSSSTGF LSISRGSLPA SRSFQWWGGM LMIVVVLCQ* 420 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| COG5309 | COG5309 | 1.0e-8 | 68 | 325 | 259 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] |
| pfam00332 | Glyco_hydro_17 | 1.0e-94 | 30 | 346 | 318 | + Glycosyl hydrolases family 17. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PIR | 0 | 26 | 355 | 28 | 355 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
| RefSeq | XP_002278950.1 | 0 | 36 | 397 | 33 | 382 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002300505.1 | 0 | 19 | 348 | 1 | 333 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002317055.1 | 0 | 26 | 355 | 1 | 333 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518930.1 | 0 | 16 | 419 | 12 | 402 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 30 | 346 | 2 | 313 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3f55_C | 0 | 30 | 346 | 2 | 313 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3f55_B | 0 | 30 | 346 | 2 | 313 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3f55_A | 0 | 30 | 346 | 2 | 313 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3em5_D | 0 | 30 | 346 | 2 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
