CAZyme Information

Basic Information
SpeciesLinum usitatissimum
Cazyme IDLus10033297
FamilyGT4
Protein PropertiesLength: 511 Molecular Weight: 57363.8 Isoelectric Point: 9.6732
ChromosomeChromosome/Scaffold: 488 Start: 504231 End: 506398
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT43304687.2e-24
  VLGVAGRLVKDKGHPILYEAISKFITNHPNVYLVVAGSGPWERRYRELGPQVMVVGSMAPSELKAFYNSIDVFVNPTLRPQGLDLTLMEAMMSGTPVMTS
  RFASIKGTIIVDDEFGFMFSPNVDSLMEALEMAVDEGAE
Full Sequence
Protein Sequence     Length: 511     Download
MNNKHRCIFS TCSNSSRNRF MAFNTHLTNN NKPKKLLLLP NSSSSLSNLC TIFFFIVIFT    60
IPSLFVLRRS PAPSSSSANQ PWSGDLRAAD FSWNRLSFVS QDSNIKLKIA VFSRKWPIGT    120
VPGGMERHAF TLHSALARRG HKVHVFTSPV HDQAFPSSTT SSHGVVIHSY KGESSRRFKY    180
REAWELFEKE NNRSSFDVIH SESVAIPYWK ARNFPNLVVT WHGIAYETLQ SKIYQDLARK    240
PKEAILPEFN ASMYGLVPKL INEIRFFHNY AQHIAISSSC GEILRDVYQI PGRRVHVIVN    300
GVDENEFGED KRLGNEFRSK IGVPANATLV LGVAGRLVKD KGHPILYEAI SKFITNHPNV    360
YLVVAGSGPW ERRYRELGPQ VMVVGSMAPS ELKAFYNSID VFVNPTLRPQ GLDLTLMEAM    420
MSGTPVMTSR FASIKGTIIV DDEFGFMFSP NVDSLMEALE MAVDEGAERL AQRGEACRVY    480
AASMFTATNM ALAHERLFLC IKNQTFCAYP * 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd03799GT1_amsK_like3.0e-32108479394+
TIGR00032argG1.0e-33123490388+
cd03811GT1_WabH_like6.0e-34123487378+
cd03798GT1_wlbH_like3.0e-43123498399+
cd03801GT1_YqgM_like1.0e-67108498402+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_002271072.107251038493PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002271108.10275101492PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002303479.10305094488predicted protein [Populus trichocarpa]
RefSeqXP_002326600.10305094487predicted protein [Populus trichocarpa]
RefSeqXP_002519899.10305105486glycosyltransferase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2gek_A0.000000000912145933343A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond
PDB2gej_A0.000000000912145933343A Chain A, Crystal Structure Of Phosphatidylinositol Mannosyltransferase (Pima) From Mycobacterium Smegmatis In Complex With Gdp-Man
PDB3c48_B0.0000001288497203431A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
PDB3c48_A0.0000001288497203431A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
PDB3c4v_B0.0000001288497183411A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
Transmembrane Domains
StartEnd
4466
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
AM7324152871914770
GR1862222612034630
FG1633432432675090
CO9850292262865110
EY1684862172935090
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_055_00071.1Aquca_004_00554.1
Arabidopsis lyrata316266919149492915
Arabidopsis thalianaAT1G73160.1AT5G59070.1AT4G19460.1
Brachypodium distachyonBradi2g45370.1
Brassica rapaBra012542Bra003857Bra013399Bra020331
Carica papayaevm.model.supercontig_305.3
Capsella rubellaCarubv10004612mCarubv10021524m
Citrus clementinaCiclev10008126mCiclev10003490m
Citrus sinensisorange1.1g039338morange1.1g044542m
Cucumis sativusCucsa.268510.1
Eucalyptus grandisEucgr.E01172.1Eucgr.F03250.1
Fragaria vescamrna27708.1-v1.0-hybridmrna27178.1-v1.0-hybrid
Glycine maxGlyma09g34990.1Glyma01g35440.1Glyma16g17250.1Glyma16g08210.1
Gossypium raimondiiGorai.009G372800.1Gorai.008G217900.1
Linum usitatissimumLus10032187Lus10014499Lus10034760
Malus domesticaMDP0000252217MDP0000510770MDP0000280727MDP0000690085
Manihot esculentacassava4.1_023608mcassava4.1_022788m
Medicago truncatulaMedtr5g026360.1Medtr8g071900.1
Mimulus guttatusmgv1a005617mmgv1a027119m
Oryza sativaLOC_Os01g46430.1
Panicum virgatumPavirv00039421mPavirv00050283m
Physcomitrella patensPp1s115_97V6.1Pp1s115_97V6.2Pp1s231_59V6.1
Phaseolus vulgarisPhvul.002G124600.1Phvul.003G277200.1
Picea abiesMA_159118g0690MA_58772g0010
Populus trichocarpaPotri.011G097000.1Potri.003G105500.1Potri.001G128300.1
Prunus persicappa004871mppa024212m
Ricinus communis30150.m00047029827.m002616
Setaria italicaSi001150m
Selaginella moellendorffii79637
Sorghum bicolorSb03g029770.1
Thellungiella halophilaThhalv10013459mThhalv10027268mThhalv10019571m
Vitis viniferaGSVIVT01036920001GSVIVT01036921001GSVIVT01036924001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny