| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10033368 |
| Family | GH47 |
| Protein Properties | Length: 631 Molecular Weight: 71147.4 Isoelectric Point: 5.1691 |
| Chromosome | Chromosome/Scaffold: 488 Start: 958696 End: 968087 |
| Description | alpha-mannosidase 1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH47 | 153 | 381 | 0 |
| AMIHAWSSYEKYAWGHDELQPQSKNGVDSFGGLGATLIDALDTLYIMGLDEQFQRAREWVANSLDFNKDYDASVFETTIRVVGGLLSAYDLSGDKLFIDK AKDIADRLLPAWDTPTGIPYNIINLEHGNPHNPGWTGGSSILADSGTEQLEFFALSQRTGDPKYQQKAEKVILELNKTFPADGLLPIYISPDTGTGSIST ITFGAMGDRQVLDFYEYLLKVWIQGNKTS | |||
| GH47 | 428 | 563 | 0 |
| VDRTLAWTCYNFYQSTPTKLAGENYFFRSGEDMSVGTSWNILRPETVESLFYLWRLTGNKTYQEWGWNIFQAFEKNSRVEGGYVGLKDVNTGIKDNMMQS FFLAETLKYLYLLFSPSSVISLDEWVFNTEAHPLRI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 631 Download |
| MGRSSRSSSS SSSKWRYCNP AYYLKRPKRL AFLFFAFVCA TLLVWDRHTL IQEHEFRALA 60 KWFLLQSDGF CPTLQVEVEK LNEELNQIKS MFTEYIFERS SETENSLLLQ LEELKGTHGD 120 EVSSVIEKSS KVTPKVIPED PVSIHRREKV KEAMIHAWSS YEKYAWGHDE LQPQSKNGVD 180 SFGGLGATLI DALDTLYIMG LDEQFQRARE WVANSLDFNK DYDASVFETT IRVVGGLLSA 240 YDLSGDKLFI DKAKDIADRL LPAWDTPTGI PYNIINLEHG NPHNPGWTGG SSILADSGTE 300 QLEFFALSQR TGDPKYQQKA EKVILELNKT FPADGLLPIY ISPDTGTGSI STITFGAMGD 360 RQVLDFYEYL LKVWIQGNKT SAVKLYSMLC SRNVGSPVIW ALGSAGYEPA ESKKFLSLAE 420 EVVMAFPVDR TLAWTCYNFY QSTPTKLAGE NYFFRSGEDM SVGTSWNILR PETVESLFYL 480 WRLTGNKTYQ EWGWNIFQAF EKNSRVEGGY VGLKDVNTGI KDNMMQSFFL AETLKYLYLL 540 FSPSSVISLD EWVFNTEAHP LRIVARQDVE SSDSGKREDK LDEPTQLTQA AGRNPFAKSP 600 STSTQKKLEN QLPAVGNISS MKTRLGIETQ * 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00470 | PTZ00470 | 2.0e-165 | 143 | 563 | 465 | + glycoside hydrolase family 47 protein; Provisional | ||
| pfam01532 | Glyco_hydro_47 | 1.0e-179 | 153 | 563 | 463 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB01459.1 | 0 | 9 | 568 | 8 | 551 | alpha 1,2-mannosidase-like protein [Arabidopsis thaliana] |
| EMBL | CBI18472.1 | 0 | 116 | 568 | 75 | 546 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_175570.1 | 0 | 1 | 581 | 1 | 554 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
| RefSeq | XP_002310939.1 | 0 | 14 | 550 | 12 | 524 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528166.1 | 0 | 110 | 593 | 20 | 517 | mannosyl-oligosaccharide alpha-1,2-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nxc_A | 0 | 138 | 570 | 12 | 472 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 1fo3_A | 0 | 139 | 563 | 2 | 456 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 1fo2_A | 0 | 139 | 563 | 2 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1fmi_A | 0 | 139 | 563 | 2 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1x9d_A | 0 | 111 | 563 | 52 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
