| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10033393 |
| Family | GH3 |
| Protein Properties | Length: 666 Molecular Weight: 72066.6 Isoelectric Point: 6.7869 |
| Chromosome | Chromosome/Scaffold: 488 Start: 1111835 End: 1115671 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH3 | 107 | 342 | 0 |
| SSRLGIPMIYGIDAVHGHNNVYNATIFPHNVGLGATRQVDPDLVKRIGAATALEARATGIPYVFAPCIAVCRDPRWGRCYESYSEDPKVVEAMTEIIPGL QGDMPAHSRRGVPYAIGKDKVAACAKHFVGDGGTTKGLNENNTIIDRHGLLSIHMPAYSDSVIKGVSTVMVSYSSWNGEKMHANRELIMGFLKGTLKFKG FVISDWQGIDRITPTAHENYTYSVQEGVLAGIDMVM | |||
| Full Sequence |
|---|
| Protein Sequence Length: 666 Download |
| MCRGSRLQLF GILWLCAWVV GTEAETAKYK DPKQPVTIRI KDLMSRMSLA EKIGQMTQLD 60 RESATPEIMR TYSIGSVLSG GGSAPLPDAT AKDWIDMVNT FQKGSMSSRL GIPMIYGIDA 120 VHGHNNVYNA TIFPHNVGLG ATRQVDPDLV KRIGAATALE ARATGIPYVF APCIAVCRDP 180 RWGRCYESYS EDPKVVEAMT EIIPGLQGDM PAHSRRGVPY AIGKDKVAAC AKHFVGDGGT 240 TKGLNENNTI IDRHGLLSIH MPAYSDSVIK GVSTVMVSYS SWNGEKMHAN RELIMGFLKG 300 TLKFKGFVIS DWQGIDRITP TAHENYTYSV QEGVLAGIDM VMLPYNHTEF IDDLTLLVKN 360 NVIPMDRIDD AVRRILLVKF NLGLFENPMA DLSFVNELGS QAHRDLAREA VRKSAVLLKN 420 GKNGTGPLLP LPKKASRILV AGTHADNLGY QCGGWTINWQ GFSGNNDTSG TTILTAIRST 480 VDPKTEVVFQ EDPNIQFLEG NKFDYAIVVG GEPPYAETAG DSSDLTMKDP GTSTISNVCG 540 AVKCVVVVVS GRPIVIEPYI GSMDALVAAW LPGSEGQGVA DVLFGDFGFT GRLARTWFKS 600 VAQLPMNLGD AHYDPLFPFD FGIKTAGFHG SIERSTSHGG ARNPCIAVLL ISAIIGLWLT 660 SLISS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 6.0e-33 | 35 | 615 | 642 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 2.0e-42 | 415 | 623 | 227 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| PRK15098 | PRK15098 | 6.0e-71 | 40 | 628 | 655 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 2.0e-84 | 47 | 458 | 419 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 2.0e-86 | 48 | 376 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002262992.1 | 0 | 25 | 659 | 24 | 653 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002266589.1 | 0 | 11 | 625 | 10 | 622 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002266675.1 | 0 | 11 | 625 | 10 | 622 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002278363.1 | 0 | 7 | 625 | 6 | 622 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002514453.1 | 0 | 5 | 651 | 2 | 646 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 29 | 625 | 5 | 599 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 1iex_A | 0 | 29 | 625 | 5 | 599 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 1iew_A | 0 | 29 | 625 | 5 | 599 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 1iev_A | 0 | 29 | 625 | 5 | 599 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 1ieq_A | 0 | 29 | 625 | 5 | 599 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
