| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10033687 |
| Family | GH5 |
| Protein Properties | Length: 435 Molecular Weight: 49798.4 Isoelectric Point: 6.6784 |
| Chromosome | Chromosome/Scaffold: 701 Start: 1113844 End: 1116118 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 53 | 386 | 8.3e-34 |
| DGKPFYVNGWNSYWLMDHSADFERKHKSAKMLEAGSKMGLTVCRTWAFNDGAHNALQLSPGRFEENVFRALDHVIAEARTHKVRLILSLVNNLQAYGGKD RYVKWAWEEGIGLSSSNDSFFYDPSIKKYFKHYLQTILTRKNTLTGIEYRNDPTIFAWELMNEPRCMTDPSGDTIQDWIEEMSAFVKSIDKNHQLTVGLE GFYGPKNPKRLTVNPADWAADLGSDFIHNSKVPHIDFASVHIYPDHWVADQSFEDKLKFVSKWMLSHIEDGHYELNKPILFTEFGLSNLNKDFHPSQRDQ LYKTVYDIIYKSAKRNRAGAGALMWQLFIEDMDE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 435 Download |
| MGGNGGGLFI PILGFASCVA FIYMSLGDLW PAAYPVEPVW SFVQRNGTRF VLDGKPFYVN 60 GWNSYWLMDH SADFERKHKS AKMLEAGSKM GLTVCRTWAF NDGAHNALQL SPGRFEENVF 120 RALDHVIAEA RTHKVRLILS LVNNLQAYGG KDRYVKWAWE EGIGLSSSND SFFYDPSIKK 180 YFKHYLQTIL TRKNTLTGIE YRNDPTIFAW ELMNEPRCMT DPSGDTIQDW IEEMSAFVKS 240 IDKNHQLTVG LEGFYGPKNP KRLTVNPADW AADLGSDFIH NSKVPHIDFA SVHIYPDHWV 300 ADQSFEDKLK FVSKWMLSHI EDGHYELNKP ILFTEFGLSN LNKDFHPSQR DQLYKTVYDI 360 IYKSAKRNRA GAGALMWQLF IEDMDESNDD FGIVPWERAS TYKIITEQSC KLAKLHGSID 420 NNNQNLKELC LRKE* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3934 | COG3934 | 0.004 | 154 | 359 | 234 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| pfam12876 | Cellulase-like | 0.002 | 200 | 295 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| pfam00150 | Cellulase | 2.0e-7 | 155 | 349 | 203 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 9.0e-27 | 84 | 392 | 315 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95966.1 | 0 | 5 | 434 | 7 | 435 | unknown [Populus trichocarpa] |
| GenBank | ACN78665.1 | 0 | 5 | 434 | 16 | 443 | endo-beta-mannanase [Malus x domestica] |
| RefSeq | NP_179660.2 | 0 | 4 | 417 | 5 | 417 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002330687.1 | 0 | 5 | 434 | 7 | 435 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517909.1 | 0 | 7 | 434 | 6 | 431 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 41 | 415 | 5 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 51 | 395 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 51 | 395 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 51 | 395 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 51 | 395 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
