Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10033861 |
Family | GT8 |
Protein Properties | Length: 598 Molecular Weight: 69228.1 Isoelectric Point: 9.0333 |
Chromosome | Chromosome/Scaffold: 222 Start: 672332 End: 675723 |
Description | galacturonosyltransferase 6 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 267 | 569 | 0 |
CLSLRLTAEFFAMSPDERQFPNQHRLHDPHLHHYALFSDNILACTVVVNSTVSSAQEQEKVVFHVVTNALNLPAISMWFLLYPPGKATIYVESIDKFEGL TANYNWILNKQNSSDPRYTSDLNHLRFYLPDVFPKLKKIVLLDHDVVVRRDLAGLWGLDLKGKVNGAVETCHDENDPSFRRMDMLINFSDPYVARKFKAG ACTWAFGMNMFDLKEWRRRALTSLYHKYLRMGSKRRLWKSGSLPLGWATFYNRTIGIDRRWHRLLALGYESKGVDYDVDNDEDDGIEEAAVLHYDGVMKP WLD |
Full Sequence |
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Protein Sequence Length: 598 Download |
MASLSSLLSF HNLRRNKDLE CKFWFWLKII KQSGVLIVLI GLGTNFIWWW MQKYRADSLE 60 IHAIEEADEG LEEPKLVVYQ EDLSQVSGNN QDREAEVQHL QTTKTSSSRS VEAILAVARC 120 LPVNDCLHFA CQRSSRDRKA RHASQKETDR KIKEIQDNVI QAKVYLSLSP PGSNTHLVKQ 180 LRQRIKELER YSEGTKDKDL PKSARGKMKA MELTLLKVNR VYQNCVDISR KLRAMTYTAE 240 EQVRAHKDEA SYLVRLAARS TPKGYHCLSL RLTAEFFAMS PDERQFPNQH RLHDPHLHHY 300 ALFSDNILAC TVVVNSTVSS AQEQEKVVFH VVTNALNLPA ISMWFLLYPP GKATIYVESI 360 DKFEGLTANY NWILNKQNSS DPRYTSDLNH LRFYLPDVFP KLKKIVLLDH DVVVRRDLAG 420 LWGLDLKGKV NGAVETCHDE NDPSFRRMDM LINFSDPYVA RKFKAGACTW AFGMNMFDLK 480 EWRRRALTSL YHKYLRMGSK RRLWKSGSLP LGWATFYNRT IGIDRRWHRL LALGYESKGV 540 DYDVDNDEDD GIEEAAVLHY DGVMKPWLDI GISKYRSYWT AFLNYNNPHF QQCNIHE* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02523 | PLN02523 | 6.0e-101 | 150 | 594 | 472 | + galacturonosyltransferase | ||
PLN02742 | PLN02742 | 6.0e-108 | 153 | 596 | 471 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 4.0e-143 | 148 | 597 | 476 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 1.0e-173 | 149 | 595 | 470 | + Probable galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 53 | 597 | 567 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_563771.1 | 0 | 53 | 596 | 50 | 588 | GAUT6 (Galacturonosyltransferase 6); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | NP_850150.1 | 0 | 57 | 597 | 55 | 610 | LGT5 (LOS GLYCOSYLTRANSFERASE 5); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002282102.1 | 0 | 53 | 597 | 50 | 588 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002307628.1 | 0 | 53 | 597 | 42 | 605 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
RefSeq | XP_002520989.1 | 0 | 50 | 596 | 54 | 632 | Glycosyltransferase QUASIMODO1, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.006 | 305 | 567 | 9 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.007 | 305 | 567 | 9 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.007 | 305 | 567 | 9 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO795725 | 468 | 153 | 598 | 0 |
ES825706 | 304 | 217 | 518 | 0 |
EX273690 | 281 | 318 | 598 | 0 |
GO846209 | 345 | 243 | 587 | 0 |
JZ192438 | 278 | 199 | 476 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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