| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10033976 |
| Family | GH14 |
| Protein Properties | Length: 534 Molecular Weight: 59281.9 Isoelectric Point: 6.7125 |
| Chromosome | Chromosome/Scaffold: 292 Start: 291498 End: 293703 |
| Description | beta-amylase 3 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 86 | 494 | 0 |
| FVGLPLDVVSECNSVNHSRAITAGLKALKFLGIEGVELPLWWGLVEKVGKGRYDWSGYLAVAEMVQKADLKLHVSLNFHANNHPKVSLPQWVSKIGESNP SIFYRDRSGDVYKDCLSLGVDDLPVLDGKTPLQVYKDFCNSFKSSFAHFLGSTVTSVTMGLGPDGELRYPSHHKLSNNGEFPVGVGEFQCSDKNMMNLLK HHAEAYGFPLWGLRGPHDAPSYNQSPDSNGFFKELSGSWESPYGDFFLSWYSKQLLSHGDRILSMAFDVFSNSGVAIHGRVPLLHSWYRTRSRAFENTAG FYNTDSKDGYEAVAEIFARNSCRMMLPGMDLSDDEQPQESMSSPEMLLAQIQAACKRHGVGVSGMNSKPVSNGFDQIRKNVMGEKDVVDLFSYQRMGAEF FSPENFPSF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 534 Download |
| MEVSLICSSQ GTFCGGELAP CRELRLCLPT RNGEALSFFD RSSRRCRNSR LRLNITAGQT 60 KLVRSDSIPV HDSATRPNSI DRVRLFVGLP LDVVSECNSV NHSRAITAGL KALKFLGIEG 120 VELPLWWGLV EKVGKGRYDW SGYLAVAEMV QKADLKLHVS LNFHANNHPK VSLPQWVSKI 180 GESNPSIFYR DRSGDVYKDC LSLGVDDLPV LDGKTPLQVY KDFCNSFKSS FAHFLGSTVT 240 SVTMGLGPDG ELRYPSHHKL SNNGEFPVGV GEFQCSDKNM MNLLKHHAEA YGFPLWGLRG 300 PHDAPSYNQS PDSNGFFKEL SGSWESPYGD FFLSWYSKQL LSHGDRILSM AFDVFSNSGV 360 AIHGRVPLLH SWYRTRSRAF ENTAGFYNTD SKDGYEAVAE IFARNSCRMM LPGMDLSDDE 420 QPQESMSSPE MLLAQIQAAC KRHGVGVSGM NSKPVSNGFD QIRKNVMGEK DVVDLFSYQR 480 MGAEFFSPEN FPSFTQFAWS LSQPATHPDD LPQQKMVESV PSTSESGIEM QTV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 2.0e-83 | 83 | 497 | 430 | + beta-amylase | ||
| PLN02801 | PLN02801 | 2.0e-104 | 83 | 497 | 431 | + beta-amylase | ||
| PLN02161 | PLN02161 | 3.0e-107 | 82 | 502 | 439 | + beta-amylase | ||
| PLN00197 | PLN00197 | 2.0e-117 | 83 | 497 | 428 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 5.0e-124 | 82 | 508 | 435 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD38148.1 | 0 | 84 | 533 | 1 | 450 | AF139501_1 beta-amylase [Prunus armeniaca] |
| EMBL | CAI39245.1 | 0 | 1 | 533 | 1 | 536 | beta-amylase [Glycine max] |
| EMBL | CAN66037.1 | 0 | 1 | 533 | 1 | 541 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002276777.1 | 0 | 1 | 533 | 1 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002516865.1 | 0 | 1 | 533 | 1 | 545 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1b1y_A | 0 | 83 | 530 | 6 | 458 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 1q6g_A | 0 | 80 | 498 | 9 | 438 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| PDB | 1v3i_A | 0 | 80 | 498 | 9 | 438 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| PDB | 1q6d_A | 0 | 80 | 498 | 9 | 438 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 1wds_A | 0 | 80 | 498 | 9 | 438 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO781436 | 410 | 129 | 534 | 0 |
| JG076371 | 256 | 279 | 534 | 0 |
| HO796964 | 393 | 146 | 534 | 0 |
| JG075315 | 240 | 295 | 534 | 0 |
| HO781436 | 63 | 76 | 137 | 4e-18 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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