y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10034218 |
Family | GH27 |
Protein Properties | Length: 470 Molecular Weight: 51983.2 Isoelectric Point: 5.2893 |
Chromosome | Chromosome/Scaffold: 310 Start: 115332 End: 118174 |
Description | Melibiase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 96 | 205 | 7e-36 |
QLQNGLARTPPMGWNSWNFFACNINETLIKETADALISTGLAELGYTYVNIDDCWSYVTRDEKGQMVPDPKTFKSGIKTLADYVHSKGLKLGIYSDAGAF TCQVRPGSIF | |||
GH27 | 193 | 395 | 0 |
GAFTCQVRPGSIFHEKEDATSFASWDVDYLKYDNCFNLGIDPKKRYPPMRDALNATGRSIFYSICEWGVDDPALWAGKVGNSWSTTEDITDTWTSMSTIA DLNDKWAAYAGPGGWNDPDMLEVGNGGMDYHEYRSHFSIWALMKAPLLIGCDVRNLTAATKEILSNVEVIAVNQDPLGVQGRKVHTNGTDGCQQVWAGPL SDH |
Full Sequence |
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Protein Sequence Length: 470 Download |
MNQLSVVFPL TSKRTIIYIK LAAAARKGLK LSIDRFLLPE MMKTGAIFAL LIITLYFPCE 60 VVAFRPLLQR YEEGNEYGYS KTFNAIFDTS KYGILQLQNG LARTPPMGWN SWNFFACNIN 120 ETLIKETADA LISTGLAELG YTYVNIDDCW SYVTRDEKGQ MVPDPKTFKS GIKTLADYVH 180 SKGLKLGIYS DAGAFTCQVR PGSIFHEKED ATSFASWDVD YLKYDNCFNL GIDPKKRYPP 240 MRDALNATGR SIFYSICEWG VDDPALWAGK VGNSWSTTED ITDTWTSMST IADLNDKWAA 300 YAGPGGWNDP DMLEVGNGGM DYHEYRSHFS IWALMKAPLL IGCDVRNLTA ATKEILSNVE 360 VIAVNQDPLG VQGRKVHTNG TDGCQQVWAG PLSDHSMAVV LWNRCSEAAV ITAQWDVIGL 420 EAGTSVSVRD LWQKKVVMNN AVASFGAQVH AHGCEMYIFT PQAAGSEAM* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03231 | PLN03231 | 7.0e-24 | 105 | 370 | 355 | + putative alpha-galactosidase; Provisional | ||
pfam02065 | Melibiase | 6.0e-25 | 103 | 260 | 204 | + Melibiase. | ||
PLN02692 | PLN02692 | 1.0e-177 | 97 | 461 | 366 | + alpha-galactosidase | ||
PLN02229 | PLN02229 | 0 | 80 | 469 | 390 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 0 | 97 | 462 | 367 | + alpha-galactosidase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAU86897.1 | 0 | 45 | 462 | 16 | 425 | glycosyl hydrolase family-like protein [Salvia miltiorrhiza] |
EMBL | CAB87430.1 | 0 | 42 | 462 | 4 | 427 | alpha-galactosidase-like protein [Arabidopsis thaliana] |
RefSeq | NP_191190.2 | 0 | 36 | 462 | 1 | 430 | alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative [Arabidopsis thaliana] |
RefSeq | XP_002279730.1 | 0 | 42 | 469 | 1 | 427 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002325481.1 | 0 | 82 | 461 | 1 | 380 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 97 | 461 | 1 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 0 | 98 | 466 | 2 | 397 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 0 | 97 | 463 | 1 | 388 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 0 | 97 | 463 | 1 | 388 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 4do6_B | 0 | 97 | 403 | 1 | 325 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GW868110 | 306 | 34 | 339 | 0 |
JG214011 | 297 | 39 | 335 | 0 |
JG216918 | 292 | 170 | 461 | 0 |
JG212773 | 292 | 170 | 461 | 0 |
JG217240 | 278 | 170 | 447 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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