y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10034525 |
Family | GH100 |
Protein Properties | Length: 568 Molecular Weight: 64534.1 Isoelectric Point: 6.821 |
Chromosome | Chromosome/Scaffold: 9 Start: 304723 End: 306959 |
Description | Plant neutral invertase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH100 | 99 | 553 | 0 |
SNPIVAEAWDLLRRSLVHFRGQPVGTIAALDHSDEKLNYDQVFVRDFVPSGLAFLMNGEYDVVKNFLLKTLHLQSWEKTVDHFQLGEGVMPASFKVLHKP ERNIETLIADFGETAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAEMPSCQRGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFM ALRCALTLLKQDSEGKEFVERIVKRLHALSYHMRSYYWLDLKPLNDIYRYKTEEYSHTAVNKFNVMPDSLPHWVFDFMPTRGGYFIGNVSPAKMDFRWFC LGNCIAILSSLATPEQAAAIMDLIEARWDELVGEMPLKVCYPAIEGHEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKSGRPQIARRALEVAESR LGKDHWPEYYDGKLGRFVGKQARKNQTWSIAGYLVAKMMLEDPSHLGMVSLEEDK |
Full Sequence |
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Protein Sequence Length: 568 Download |
MAPLVDLSQN GTAEYSDDDS DDILKLLDTT KPIKVERPKS FGERSYNELS AAVAAATAVS 60 PRHYRNYEAT SRVDHIDYVY SPGRWSGFNS PRSSIHFESN PIVAEAWDLL RRSLVHFRGQ 120 PVGTIAALDH SDEKLNYDQV FVRDFVPSGL AFLMNGEYDV VKNFLLKTLH LQSWEKTVDH 180 FQLGEGVMPA SFKVLHKPER NIETLIADFG ETAIGRVAPV DSGFWWIILL RAYTKSTGDS 240 SLAEMPSCQR GMRLILSLCL SEGFDTFPTL LCADGCCMID RRMGVYGYPI EIQALFFMAL 300 RCALTLLKQD SEGKEFVERI VKRLHALSYH MRSYYWLDLK PLNDIYRYKT EEYSHTAVNK 360 FNVMPDSLPH WVFDFMPTRG GYFIGNVSPA KMDFRWFCLG NCIAILSSLA TPEQAAAIMD 420 LIEARWDELV GEMPLKVCYP AIEGHEWRIV TGCDPKNTRW SYHNGGSWPV LLWMLTAACI 480 KSGRPQIARR ALEVAESRLG KDHWPEYYDG KLGRFVGKQA RKNQTWSIAG YLVAKMMLED 540 PSHLGMVSLE EDKLMKPLMK RSTSWTC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 1.0e-5 | 461 | 560 | 104 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
PLN02973 | PLN02973 | 0 | 32 | 567 | 539 | + beta-fructofuranosidase | ||
PLN03005 | PLN03005 | 0 | 33 | 567 | 538 | + beta-fructofuranosidase | ||
pfam12899 | Glyco_hydro_100 | 0 | 105 | 541 | 438 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
PLN02703 | PLN02703 | 0 | 102 | 552 | 457 | + beta-fructofuranosidase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAH20183.1 | 0 | 5 | 567 | 8 | 571 | AT4G34860 [Arabidopsis thaliana] |
EMBL | CAP59641.1 | 0 | 7 | 566 | 8 | 572 | putative neutral invertase [Vitis vinifera] |
EMBL | CAP59642.1 | 0 | 7 | 566 | 8 | 572 | putative neutral invertase [Vitis vinifera] |
RefSeq | NP_195212.1 | 0 | 5 | 567 | 8 | 571 | beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative [Arabidopsis thaliana] |
RefSeq | XP_002276670.1 | 0 | 7 | 566 | 8 | 571 | PREDICTED: similar to putative neutral invertase [Vitis vinifera] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES848839 | 362 | 201 | 560 | 0 |
CK269009 | 329 | 238 | 566 | 0 |
ES809234 | 324 | 228 | 551 | 0 |
JG588921 | 317 | 234 | 550 | 0 |
HO466454 | 472 | 85 | 552 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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