Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10034607 |
Family | CBM43 |
Protein Properties | Length: 468 Molecular Weight: 50075.7 Isoelectric Point: 6.0687 |
Chromosome | Chromosome/Scaffold: 9 Start: 931919 End: 933516 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 328 | 409 | 3.2e-31 |
CVAKERSDRKQLQAALDWACGPGRVDCSPMLKGEPCYEPDNVIAHATFAFNSYYQRMAKSPGSCDFKGVAAITTTDPSHGPC | |||
GH17 | 2 | 309 | 0 |
PSPPQVVALLKAQNIRHVRLYDADRDMLAALANSGIHVTISVPDDQLLGIGQSNATAANWVARNVISHVPTTNITAIAVGSEVLTSLPNAAPVLVSALNF IHSALVAANLDSRIKVSTPHSSSIILDSFPPSQAFFNRTWNPVMVPLLKFLQSTGSYLMLNVYPYYDYIQANGVIPLDYALFRPLRPNKEAVDSNTLLHY TNVFDALVDAAYAAMSALNFTDIPVVVTETGWPSKGDSSEQDATTDNANTYNSNLIKHVLNNTGTPKHPGIAVSTYIYELYNEDLATGTPSEKNWGLFDA NGIPVYIL |
Full Sequence |
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Protein Sequence Length: 468 Download |
MPSPPQVVAL LKAQNIRHVR LYDADRDMLA ALANSGIHVT ISVPDDQLLG IGQSNATAAN 60 WVARNVISHV PTTNITAIAV GSEVLTSLPN AAPVLVSALN FIHSALVAAN LDSRIKVSTP 120 HSSSIILDSF PPSQAFFNRT WNPVMVPLLK FLQSTGSYLM LNVYPYYDYI QANGVIPLDY 180 ALFRPLRPNK EAVDSNTLLH YTNVFDALVD AAYAAMSALN FTDIPVVVTE TGWPSKGDSS 240 EQDATTDNAN TYNSNLIKHV LNNTGTPKHP GIAVSTYIYE LYNEDLATGT PSEKNWGLFD 300 ANGIPVYILH LTGAGTVLAN DSTNQTFCVA KERSDRKQLQ AALDWACGPG RVDCSPMLKG 360 EPCYEPDNVI AHATFAFNSY YQRMAKSPGS CDFKGVAAIT TTDPSHGPCI VPGSVGKHGT 420 LTNTTLLAPS SNSTSNSGSP VPYSFYAGVS SFSASVTMCI LLVCMVF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 8.0e-8 | 19 | 302 | 292 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-18 | 326 | 397 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-36 | 326 | 410 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-89 | 2 | 307 | 306 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI26850.1 | 0 | 1 | 429 | 34 | 462 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002312452.1 | 0 | 1 | 467 | 15 | 478 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314794.1 | 0 | 1 | 466 | 29 | 491 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527772.1 | 0 | 1 | 429 | 34 | 462 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002531922.1 | 0 | 1 | 440 | 45 | 482 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 1 | 311 | 12 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 1 | 312 | 14 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 1 | 312 | 14 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 1 | 312 | 14 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 1 | 312 | 14 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR951683 | 294 | 33 | 326 | 0 |
EX302541 | 294 | 1 | 294 | 0 |
GE476981 | 314 | 61 | 374 | 0 |
DK466504 | 288 | 3 | 290 | 0 |
JG229932 | 220 | 148 | 367 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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