y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10034690 |
Family | CBM43 |
Protein Properties | Length: 264 Molecular Weight: 26718.8 Isoelectric Point: 7.0246 |
Chromosome | Chromosome/Scaffold: 9 Start: 1444690 End: 1447242 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 78 | 158 | 1.1e-30 |
WCVCKDMPDAVLQKALDYACGAGADCNPTRQNGQCFQPNTVRAHCSYAVNSYYQKKGQSQGSCDFSGAATISTSDPSVTGC |
Full Sequence |
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Protein Sequence Length: 264 Download |
MAENPPNYDA LAIEAHTPTT ISSFYGHILN PKSHLFPNSS TQLPLIPRPI IACCHSKMAL 60 LLLIGMLMAM TGHATCTWCV CKDMPDAVLQ KALDYACGAG ADCNPTRQNG QCFQPNTVRA 120 HCSYAVNSYY QKKGQSQGSC DFSGAATIST SDPSVTGCSY PATASGSNTA SQGTTSSPKT 180 GGTSTTTTSV PNSSNNPYSS SNGSGGVGGT GTGTGNGLGS SGPGGYTDLN DSAASAALFT 240 PSLTTAAAVS FFLLGSLLLK GEL* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 7.0e-19 | 77 | 147 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-34 | 77 | 160 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92735.1 | 0 | 58 | 167 | 1 | 110 | unknown [Populus trichocarpa] |
GenBank | ABK93473.1 | 0 | 71 | 254 | 14 | 203 | unknown [Populus trichocarpa] |
RefSeq | XP_002317963.1 | 0 | 71 | 163 | 14 | 106 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002328640.1 | 0 | 58 | 165 | 1 | 108 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514663.1 | 0 | 58 | 163 | 1 | 106 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 7e-20 | 77 | 168 | 12 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |