| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10034820 |
| Family | GH47 |
| Protein Properties | Length: 575 Molecular Weight: 65086.5 Isoelectric Point: 5.34 |
| Chromosome | Chromosome/Scaffold: 66 Start: 735133 End: 740809 |
| Description | alpha-mannosidase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH47 | 114 | 545 | 0 |
| AMIHAWSSYEKYAWGHDELQPQSKNGVDSFGGLGATLIDALDTLYIMGLDEQFQRAREWVANSLDFNKDYDASVFETTIRVVGGLLSAYDLSGDKLFIEK AKDIADRLLPAWDTPTGIPYNIINLEHGNPHNPGWTGGSSILADSGTEQLEFFALSQRTGDPKYQQKAEKVILELNKTFPADGLLPIYISPDTGAGAIST ITFGAMGDSFYEYLLKVWIQGNKTSAVKLYRDMWEKSMKGLLSLIRRSTPSSYTYICEKSGDWLTDKMDELACFAPGMLALGSAGYEPAESKKFLSLAEE LAWTCYNFYQSTPTKLAGENYFFRSGEDMSVGTSWNIMRPETVESLFYLWRLTGNKTYQEWGWNIFQAFEKNSRVEGGYVGLKDVNTGIKDNMMQSFFLA ETLKYLYLLFSPSSVISLDEWVFNTEAHPLRI | |||
| Full Sequence |
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| Protein Sequence Length: 575 Download |
| MARSSRSSSS SSSKWRYCNP AYYLKRPKRL AFLFFAFVCA TLLVWDRHTL VQEHEVEVEK 60 LNEELNQIKS MLEEFKGTHG DEVSSVIEKS SKVTPKVIPE DPVGIHRREK VKEAMIHAWS 120 SYEKYAWGHD ELQPQSKNGV DSFGGLGATL IDALDTLYIM GLDEQFQRAR EWVANSLDFN 180 KDYDASVFET TIRVVGGLLS AYDLSGDKLF IEKAKDIADR LLPAWDTPTG IPYNIINLEH 240 GNPHNPGWTG GSSILADSGT EQLEFFALSQ RTGDPKYQQK AEKVILELNK TFPADGLLPI 300 YISPDTGAGA ISTITFGAMG DSFYEYLLKV WIQGNKTSAV KLYRDMWEKS MKGLLSLIRR 360 STPSSYTYIC EKSGDWLTDK MDELACFAPG MLALGSAGYE PAESKKFLSL AEELAWTCYN 420 FYQSTPTKLA GENYFFRSGE DMSVGTSWNI MRPETVESLF YLWRLTGNKT YQEWGWNIFQ 480 AFEKNSRVEG GYVGLKDVNT GIKDNMMQSF FLAETLKYLY LLFSPSSVIS LDEWVFNTEA 540 HPLRIVARQD VESSDNGKRE DKVSRSRGRK EGQW* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01532 | Glyco_hydro_47 | 0 | 114 | 545 | 451 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| PTZ00470 | PTZ00470 | 0 | 105 | 545 | 452 | + glycoside hydrolase family 47 protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF16414.1 | 0 | 1 | 573 | 1 | 576 | AF126550_1 mannosyl-oligosaccharide 1,2-alpha-mannosidase [Glycine max] |
| EMBL | CBI18472.1 | 0 | 1 | 573 | 1 | 571 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_175570.1 | 0 | 1 | 562 | 1 | 553 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
| RefSeq | XP_002310939.1 | 0 | 14 | 532 | 12 | 524 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528166.1 | 0 | 55 | 574 | 11 | 522 | mannosyl-oligosaccharide alpha-1,2-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nxc_A | 0 | 99 | 552 | 12 | 472 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 1fo3_A | 0 | 100 | 545 | 2 | 456 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 1fo2_A | 0 | 100 | 545 | 2 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1fmi_A | 0 | 100 | 545 | 2 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 1x9d_A | 0 | 70 | 545 | 50 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO780776 | 264 | 250 | 512 | 0 |
| HO780776 | 175 | 22 | 195 | 0 |
| HO780776 | 55 | 192 | 246 | 0 |
| CU615093 | 320 | 254 | 573 | 0 |
| HO780776 | 72 | 503 | 573 | 2e-19 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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