Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10035204 |
Family | AA2 |
Protein Properties | Length: 270 Molecular Weight: 28282.1 Isoelectric Point: 5.2656 |
Chromosome | Chromosome/Scaffold: 43 Start: 1073518 End: 1075321 |
Description | root hair specific 19 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 48 | 230 | 0 |
VQQVVAAKAGRQFPTLPATLRLFFHDCFVTGCDASVMVASPNGDAEKDALDNLSLAGDGFDAVSRAKTAVEAICPGVVSCADIIAIAARDVVALAGGPTF AVELGRRDGMISSVSLVAGNLPEPNMTLPELNAIFAKHNLTQFDMIALSGVHTLGFSHCNRFFNRIYSSTVDPSLNSTYAQQL |
Full Sequence |
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Protein Sequence Length: 270 Download |
MGYFSSSTSA AMIMIIVATT IAGGGGVSGQ GLRENFYAGS CPMVEPIVQQ VVAAKAGRQF 60 PTLPATLRLF FHDCFVTGCD ASVMVASPNG DAEKDALDNL SLAGDGFDAV SRAKTAVEAI 120 CPGVVSCADI IAIAARDVVA LAGGPTFAVE LGRRDGMISS VSLVAGNLPE PNMTLPELNA 180 IFAKHNLTQF DMIALSGVHT LGFSHCNRFF NRIYSSTVDP SLNSTYAQQL MTACPRNVDP 240 SIRNRHGSDD SEGIRQRVLP ESGRGEGYV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00314 | plant_peroxidase_like | 5.0e-7 | 54 | 209 | 176 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
PLN02608 | PLN02608 | 8.0e-8 | 143 | 208 | 66 | + L-ascorbate peroxidase | ||
pfam00141 | peroxidase | 1.0e-43 | 48 | 200 | 153 | + Peroxidase. | ||
PLN03030 | PLN03030 | 6.0e-44 | 30 | 243 | 219 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 1.0e-90 | 31 | 243 | 218 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI21341.1 | 0 | 29 | 242 | 7 | 206 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274131.1 | 0 | 12 | 242 | 12 | 242 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298633.1 | 0 | 29 | 242 | 6 | 224 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002328876.1 | 0 | 13 | 242 | 6 | 237 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509503.1 | 0 | 29 | 242 | 26 | 244 | Peroxidase 55 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3hdl_A | 0 | 32 | 237 | 2 | 211 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1gwo_A | 0 | 32 | 237 | 3 | 213 | A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln |
PDB | 1fhf_C | 0 | 32 | 237 | 2 | 211 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 1fhf_B | 0 | 32 | 237 | 2 | 211 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 1fhf_A | 0 | 32 | 237 | 2 | 211 | A Chain A, The Structure Of Soybean Peroxidase |