| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10035673 |
| Family | AA3 |
| Protein Properties | Length: 738 Molecular Weight: 81249 Isoelectric Point: 7.4239 |
| Chromosome | Chromosome/Scaffold: 464 Start: 842083 End: 846239 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA3 | 197 | 721 | 0 |
| INTNLPTSTITESLQKSGFKVSATTTGSINIKCDAVVVGSGSGGGVVAGMLANAGFKVLVLEKGSYFARSNLSLLEGPSMDQMYLSGGLLATDNMSFVVL AGSTVGGGSAINWSASIKTPHKVTKEWSHENQLELFESKMYREAMEVVCRRMGVHTKVDVEEGLNNAVLRKGCQQLGYPVDDIPRNSDAKHGCGWCCFGC REGRKMGTSETWLVDLVNSGNGVILPGCEAVKVLHESRNGRKIATGVVFESMTKEIFMVESKVTVVACGALSTPPLLRRSGLRNRHIGENLHLHPVTMAW GYFPDEEVGKQRSYEGPIMTAMSKVSEDESDDDDGLYGAIIQTPSLHPGMFSSFMPWVSGYDLKRRMTRFSRTAHIFTLARDRGSGAVKDCSDNISYEME ESDERNLQKGVEKILRILAAAGAEEIGTHNLGGKSINVKEVGSEELERFVKEESRRPIRGLRTQLGSAHQMGSCRMGVDPEVSVVKETGETWEVEGLYVA DSSVFPTALGVNPMVTVQAIAYCTA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 738 Download |
| MMTGNDITER EMKSLISICD TFFPSINNHH HQSAVVAEFY QTSASMAGTP QRIGRLISGR 60 LKHPKVWLVR LSLWLLSTWI GTFILCGRLS ISSRFPFILS FPEIPLEKRE QIVLSWSQSI 120 FFHLRMLFKA FKLLIPLVFF SQVDEKNENP SWEAIGYPGS DPAYKTAEQH PPNEPLPAAN 180 ITNTKEHPHG PLHRGIINTN LPTSTITESL QKSGFKVSAT TTGSINIKCD AVVVGSGSGG 240 GVVAGMLANA GFKVLVLEKG SYFARSNLSL LEGPSMDQMY LSGGLLATDN MSFVVLAGST 300 VGGGSAINWS ASIKTPHKVT KEWSHENQLE LFESKMYREA MEVVCRRMGV HTKVDVEEGL 360 NNAVLRKGCQ QLGYPVDDIP RNSDAKHGCG WCCFGCREGR KMGTSETWLV DLVNSGNGVI 420 LPGCEAVKVL HESRNGRKIA TGVVFESMTK EIFMVESKVT VVACGALSTP PLLRRSGLRN 480 RHIGENLHLH PVTMAWGYFP DEEVGKQRSY EGPIMTAMSK VSEDESDDDD GLYGAIIQTP 540 SLHPGMFSSF MPWVSGYDLK RRMTRFSRTA HIFTLARDRG SGAVKDCSDN ISYEMEESDE 600 RNLQKGVEKI LRILAAAGAE EIGTHNLGGK SINVKEVGSE ELERFVKEES RRPIRGLRTQ 660 LGSAHQMGSC RMGVDPEVSV VKETGETWEV EGLYVADSSV FPTALGVNPM VTVQAIAYCT 720 ALSVLERLRR KKLCSEF* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 3.0e-7 | 640 | 703 | 65 | + choline dehydrogenase; Validated | ||
| pfam05199 | GMC_oxred_C | 2.0e-23 | 590 | 718 | 129 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 1.0e-40 | 247 | 735 | 556 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 7.0e-72 | 276 | 492 | 222 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29206.1 | 0 | 5 | 728 | 33 | 644 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_193673.2 | 0 | 12 | 732 | 1 | 726 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002269629.1 | 0 | 5 | 732 | 33 | 787 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328753.1 | 0 | 12 | 732 | 1 | 745 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519938.1 | 0 | 52 | 732 | 7 | 709 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.00001 | 228 | 478 | 17 | 281 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 3ljp_B | 0.00002 | 364 | 716 | 169 | 518 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3ljp_A | 0.00002 | 364 | 716 | 169 | 518 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3nne_H | 0.00004 | 364 | 716 | 169 | 518 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
