| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10035679 |
| Family | GH14 |
| Protein Properties | Length: 735 Molecular Weight: 82623.5 Isoelectric Point: 6.6575 |
| Chromosome | Chromosome/Scaffold: 464 Start: 878847 End: 885300 |
| Description | beta-amylase 2 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 243 | 638 | 0 |
| YVMLANGFINNFSQLIDSQGVRQELSRLKSLDVDGIVVDCWWGIVEAWSPQKYIWSGYRELFHLVREFNLKLQVVMAFHEYGRNESSEVLISLPQWVLEI GKENRDIFFTDREGRRSTECLSWGVDKERVLKGRTGIEVYFDFMRSFRTEFDDLFVEGIITAVEISLGASGELRYPSFPERMGWRYPGIGEFQCYDKYLQ RNLQRAAKLQELSVWAGSPDNAGQYNSRPHETGFFCERGDYDSYFGRFFLRWYTQLLISHADDVLSLAALAFEDTKLIVKIPAVYWWYKTASHAAELTAG FYNPSNQDGYSPVFKALKKHSVVVKLACPGLQVSGHDEALSDPEGLCWQVLNAAWDRGLMVAGTNMLSLYGREGYMKVVDMAKPKNDPDHHHFSFF | |||
| Full Sequence |
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| Protein Sequence Length: 735 Download |
| MSTPIDDQNL LLDPYSQPLP TSSSNSHQHP QPQLRRPRGF AATAAAAASD ANGSNVSGVK 60 GKREREKEKE RTKLRERHRR AITSRMLAGL RQYGNFPLPA RADMNDVLAS LAREAGWTVE 120 ADGTTYRQSS HPPPLPHLAT YGGGVRAVQS PTISATSLQA CSVEAALDGQ QHPALRMDGS 180 LSPAASLDSV VISDRDTRNE GEKFPNSSPI NSVDCLDADQ LIQDVRSSEH VNDFTGSQYV 240 PVYVMLANGF INNFSQLIDS QGVRQELSRL KSLDVDGIVV DCWWGIVEAW SPQKYIWSGY 300 RELFHLVREF NLKLQVVMAF HEYGRNESSE VLISLPQWVL EIGKENRDIF FTDREGRRST 360 ECLSWGVDKE RVLKGRTGIE VYFDFMRSFR TEFDDLFVEG IITAVEISLG ASGELRYPSF 420 PERMGWRYPG IGEFQCYDKY LQRNLQRAAK LQELSVWAGS PDNAGQYNSR PHETGFFCER 480 GDYDSYFGRF FLRWYTQLLI SHADDVLSLA ALAFEDTKLI VKIPAVYWWY KTASHAAELT 540 AGFYNPSNQD GYSPVFKALK KHSVVVKLAC PGLQVSGHDE ALSDPEGLCW QVLNAAWDRG 600 LMVAGTNMLS LYGREGYMKV VDMAKPKNDP DHHHFSFFIY QQSSPLLQGM VCFPELDYFI 660 KCMHGCVLKV HKTLYNNFKE YKSVNDMRGC VGNMHHGLDL GVIPKLRRIC GLTGNLTLAQ 720 ELAEIILCVF SHEK* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00197 | PLN00197 | 3.0e-99 | 240 | 612 | 381 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 6.0e-116 | 240 | 625 | 391 | + beta-amylase | ||
| PLN02801 | PLN02801 | 6.0e-143 | 239 | 664 | 433 | + beta-amylase | ||
| PLN02705 | PLN02705 | 0 | 2 | 665 | 679 | + beta-amylase | ||
| PLN02905 | PLN02905 | 0 | 81 | 665 | 602 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29216.1 | 0 | 72 | 665 | 19 | 604 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_199343.1 | 0 | 8 | 667 | 15 | 684 | BMY2 (BETA-AMYLASE 2); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002270680.1 | 0 | 65 | 665 | 70 | 662 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002304400.1 | 0 | 1 | 665 | 1 | 666 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519919.1 | 0 | 3 | 665 | 2 | 664 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wds_A | 0 | 238 | 627 | 10 | 401 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
| PDB | 1wdr_A | 0 | 238 | 627 | 10 | 401 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1byd_A | 0 | 238 | 627 | 10 | 401 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1byc_A | 0 | 238 | 627 | 10 | 401 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1byb_A | 0 | 238 | 627 | 10 | 401 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| JG649066 | 276 | 284 | 559 | 0 |
| EB439624 | 285 | 286 | 570 | 0 |
| JG181157 | 206 | 460 | 665 | 0 |
| JG172913 | 206 | 460 | 665 | 0 |
| JG181157 | 22 | 660 | 681 | 0.046 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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