| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10035727 |
| Family | GH47 |
| Protein Properties | Length: 577 Molecular Weight: 65277.5 Isoelectric Point: 4.9382 |
| Chromosome | Chromosome/Scaffold: 464 Start: 1101872 End: 1108407 |
| Description | alpha-mannosidase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH47 | 118 | 549 | 0 |
| AMIHAWSSYEKYAWGNDELQPQTKNGVDSFGGLGATLIDALDTLYIMGLDEQFQRAREWVANSLDFNKDYDASVFETTIRVVGGLLSAYDLSGDKVFIEK AKDIADRLLPAWDTPTGIPYNVINLENGNPHNPGWTGGSSILADSGTEQLEFFALSQRTGDPKYQQKAEKVILELNKTFPADGLLPIYISPDTGIASSTT ITFGAMGDSFYEYLLKVWIQGNRTSAVKLYRDMWEKSMKGLLSLIRRSSPSSFTYICEKSGDWLTDKMDELACFAPGMLALGSSGYEQAESERMLSLAEE LAWTCYNFYQSTPTKLAGENYFFRSGQDMSVGTSWNILRPETVESLFYLWRLTGNKTYQEWGWNIFQAFEKNSRVEGGYVGLKDVNTGIKDNMMQSFFLA ETLKYLYLLFSPTSVISLDEWVFNTEAHPLRI | |||
| Full Sequence |
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| Protein Sequence Length: 577 Download |
| MGRSSRSSAS SSSSSSSSTW RYCNPSYYLK RPKRLAMLFL AFVCATMFVW DRQTLVREHE 60 VEVVKLYEEV NQLKTILEEL KITQGDEVGS VRKSSKVSQK APPEDPVDIH RREKVREAMI 120 HAWSSYEKYA WGNDELQPQT KNGVDSFGGL GATLIDALDT LYIMGLDEQF QRAREWVANS 180 LDFNKDYDAS VFETTIRVVG GLLSAYDLSG DKVFIEKAKD IADRLLPAWD TPTGIPYNVI 240 NLENGNPHNP GWTGGSSILA DSGTEQLEFF ALSQRTGDPK YQQKAEKVIL ELNKTFPADG 300 LLPIYISPDT GIASSTTITF GAMGDSFYEY LLKVWIQGNR TSAVKLYRDM WEKSMKGLLS 360 LIRRSSPSSF TYICEKSGDW LTDKMDELAC FAPGMLALGS SGYEQAESER MLSLAEELAW 420 TCYNFYQSTP TKLAGENYFF RSGQDMSVGT SWNILRPETV ESLFYLWRLT GNKTYQEWGW 480 NIFQAFEKNS RVEGGYVGLK DVNTGIKDNM MQSFFLAETL KYLYLLFSPT SVISLDEWVF 540 NTEAHPLRIT NLQDGETNGY TDDKLTRSRG RKEGQW* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1331 | COG1331 | 0.003 | 197 | 289 | 94 | + Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] | ||
| pfam01532 | Glyco_hydro_47 | 0 | 118 | 549 | 451 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). | ||
| PTZ00470 | PTZ00470 | 0 | 108 | 551 | 455 | + glycoside hydrolase family 47 protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF16414.1 | 0 | 20 | 575 | 15 | 576 | AF126550_1 mannosyl-oligosaccharide 1,2-alpha-mannosidase [Glycine max] |
| EMBL | CBI18472.1 | 0 | 11 | 575 | 2 | 571 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_175570.1 | 0 | 9 | 554 | 2 | 541 | mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative [Arabidopsis thaliana] |
| RefSeq | XP_002310939.1 | 0 | 20 | 536 | 13 | 524 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528166.1 | 0 | 69 | 576 | 13 | 522 | mannosyl-oligosaccharide alpha-1,2-mannosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nxc_A | 0 | 103 | 559 | 12 | 475 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 1x9d_A | 0 | 84 | 549 | 56 | 534 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 1fo3_A | 0 | 104 | 549 | 2 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 1fo2_A | 0 | 104 | 549 | 2 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin |
| PDB | 1fmi_A | 0 | 104 | 549 | 2 | 456 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO780776 | 264 | 254 | 516 | 0 |
| HO780776 | 175 | 27 | 199 | 0 |
| HO780776 | 55 | 196 | 250 | 0 |
| DY974119 | 307 | 179 | 485 | 0 |
| HO780776 | 72 | 507 | 575 | 2e-18 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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