| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10036006 |
| Family | CE8 |
| Protein Properties | Length: 382 Molecular Weight: 40986.8 Isoelectric Point: 8.6172 |
| Chromosome | Chromosome/Scaffold: 76 Start: 670853 End: 673650 |
| Description | plasmodesmata-located protein 6 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 21 | 118 | 5e-22 |
| STVTSVVHCDITGAVQKSFLGRAWSKMPKTAFLYCNIGSVICPSGWSDNNKPERDATLDFLEYKNTGPAGIATDRAKFSKQLSDAEAQHYLSLGFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 382 Download |
| MEASSPRRLE TNLTPRATHL STVTSVVHCD ITGAVQKSFL GRAWSKMPKT AFLYCNIGSV 60 ICPSGWSDNN KPERDATLDF LEYKNTGPAG IATDRAKFSK QLSDAEAQHY LSLGFIQGSS 120 CLLLSLQQLH FFFYPIFLPN HIRPLPVPRR PPSRRLQPLP LQGSRCIARA VTQLGTLCAS 180 SCGGALQLDG CLIKYDNVTF LGVEDKTVLF RKCGPYDYDS SSSSSTLLAR RNAVLDYVAA 240 AGGGGGDGYR VGGSGEIHAV AQCVQDLSRS ECQDCVSEAI GELKSACGAS AWGDMFLGKC 300 YARFSEGGAH SRGGGGGQGT SNNNDEEIEK TLAILIGLIA GVALLIVFLS FLRKLCERGK 360 GKPNPTTPTP FLYKCRKSVR I* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02773 | PLN02773 | 1.0e-13 | 29 | 116 | 90 | + pectinesterase | ||
| PLN02304 | PLN02304 | 1.0e-14 | 25 | 116 | 92 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 1.0e-15 | 25 | 116 | 92 | + pectinesterase family protein | ||
| PLN02671 | PLN02671 | 8.0e-20 | 25 | 116 | 92 | + pectinesterase | ||
| PLN02665 | PLN02665 | 1.0e-31 | 25 | 116 | 92 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK93292.1 | 0 | 166 | 316 | 98 | 243 | unknown [Populus trichocarpa] |
| GenBank | ABK95645.1 | 0 | 164 | 329 | 96 | 252 | unknown [Populus trichocarpa] |
| EMBL | CBI26844.1 | 0 | 160 | 319 | 122 | 273 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002284879.1 | 0 | 160 | 319 | 99 | 250 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002525981.1 | 0 | 164 | 361 | 101 | 288 | DUF26 domain-containing protein 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0.00004 | 35 | 122 | 215 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0.0001 | 21 | 122 | 192 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
