| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10036007 |
| Family | CE8 |
| Protein Properties | Length: 194 Molecular Weight: 20643.9 Isoelectric Point: 9.7871 |
| Chromosome | Chromosome/Scaffold: 76 Start: 673828 End: 674409 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 72 | 193 | 4.2e-30 |
| IKVRPDGSGQFTTLTDAINSIPSGNTRRVIIDLGSGLYTEKVMIERSRPFITLIGDPKAMPILQFGGTAREFGTVYSATLQVEADYFVATNIIFKNTAPK PDGTKKGEQALALRIGGHMATF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 194 Download |
| MGIRGGDFMF ITVVLTLLAA GLNKISADDL TPIPADKAQV EAWFKANVKP LAERKATLNA 60 TLLAAEANAT TIKVRPDGSG QFTTLTDAIN SIPSGNTRRV IIDLGSGLYT EKVMIERSRP 120 FITLIGDPKA MPILQFGGTA REFGTVYSAT LQVEADYFVA TNIIFKNTAP KPDGTKKGEQ 180 ALALRIGGHM ATF* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02480 | PLN02480 | 3.0e-22 | 72 | 193 | 122 | + Probable pectinesterase | ||
| pfam01095 | Pectinesterase | 4.0e-24 | 74 | 193 | 126 | + Pectinesterase. | ||
| PLN02634 | PLN02634 | 2.0e-25 | 72 | 193 | 129 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 1.0e-32 | 78 | 193 | 123 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 1.0e-87 | 12 | 193 | 182 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002309337.1 | 0 | 8 | 193 | 8 | 193 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002318197.1 | 0 | 6 | 193 | 2 | 189 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002333446.1 | 0 | 25 | 193 | 22 | 190 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002336983.1 | 0 | 6 | 193 | 2 | 189 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002511043.1 | 0 | 8 | 193 | 10 | 192 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0.0000000001 | 72 | 193 | 9 | 126 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0.000003 | 74 | 191 | 7 | 120 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 0.0001 | 61 | 179 | 25 | 145 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.005 | 64 | 186 | 1 | 135 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.005 | 64 | 186 | 1 | 135 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
