| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10036154 |
| Family | GT31 |
| Protein Properties | Length: 679 Molecular Weight: 76935.2 Isoelectric Point: 8.6008 |
| Chromosome | Chromosome/Scaffold: 76 Start: 1535098 End: 1537932 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 446 | 628 | 0 |
| ERMAVRKTWMQSSSIKSSNVVVRFFVALNPRKEVNAVLKMEADYFGDIVILPFMDRYELVVLKTISICEFGVKNVSAAYIMKCDDDTFVRVETVLKEIGQ VSRKKSLYMGNLNLLHRPLRNGKWAVTFEEWPEAVYPPYANGPGYVISSDIANFIVSQRSKRILRLFKMEDVSMGMWVENFNS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 679 Download |
| MKRLKVEPSS GRRFKLSHLL LGVAALYLVF LASKFHHFLE IAATLSGDET YFDTGGETGP 60 ESDLSKPLFS SAYMDTSNHQ KLEDNQNEDA PNKAAMEEVK GGGSKPLKPI QHYGRITGEI 120 LRRLNRTSDM SSLERMADEA WTLGLKAWQE MGKYKGEDIG QTSSVLDGKP ESCPLWLSMN 180 GEELDRGDAM VFLPCGLAAG SSITVIGKPH YAHPEFVPQL ARLRHGDGIV MVSQFVIELQ 240 GLKAVDGEDP PKILHLNPRL KGDWSRRPVI EHNTCYRMQW GTAQRCDGSG SKKDEDMTVD 300 GYVRCEKWMR RDAVDSKESK TTSWFKRFIG REQKPDVTWP FPFVEGRLFI LTLRAGVDGY 360 HINVGGRHVT SFPYRPGFTL EDATGLAIKG DVDIQSVYAT SLPNSHPSFS PQRVLEMSEK 420 WKARPISKSP IWLFIGILSA TNHFAERMAV RKTWMQSSSI KSSNVVVRFF VALNPRKEVN 480 AVLKMEADYF GDIVILPFMD RYELVVLKTI SICEFGVKNV SAAYIMKCDD DTFVRVETVL 540 KEIGQVSRKK SLYMGNLNLL HRPLRNGKWA VTFEEWPEAV YPPYANGPGY VISSDIANFI 600 VSQRSKRILR LFKMEDVSMG MWVENFNSTT AVHYSHSWKF CQYGCMEDYF TAHYQSPRQM 660 ICLWDKLSRG RPHCCNFR* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00908 | Gal-bind_lectin | 2.0e-18 | 194 | 397 | 204 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 2.0e-20 | 191 | 397 | 207 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam00337 | Gal-bind_lectin | 2.0e-23 | 193 | 397 | 205 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| pfam01762 | Galactosyl_T | 9.0e-27 | 445 | 624 | 188 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03133 | PLN03133 | 8.0e-127 | 147 | 675 | 546 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001154260.1 | 0 | 1 | 678 | 1 | 684 | galactosyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002272405.1 | 0 | 12 | 678 | 3 | 669 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002308783.1 | 0 | 133 | 678 | 1 | 545 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002322528.1 | 0 | 136 | 678 | 1 | 542 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002531052.1 | 0 | 1 | 678 | 1 | 683 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
