| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10036436 |
| Family | GH5 |
| Protein Properties | Length: 513 Molecular Weight: 57512.9 Isoelectric Point: 8.5336 |
| Chromosome | Chromosome/Scaffold: 57 Start: 633733 End: 636721 |
| Description | |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 214 | 487 | 3.89981e-42 |
| EHWNTFIVEEDFKFISKNRLNSVRIPVGWWIASDPRPPKPFVGGSLNALDKAFCWAEKYGLKVILDLHAAPGSQNGFEHSSSRDGSQEWGLTDKNIQQTV RVIDFLSARYAKSRSLYAVELINEPMSPGVSLANVEKYYQAGYNAVRRHSLTAYVVLSNGLGDSQPRELFTLASELKGAVIDVHYYNLFSSVFDDLTVQQ NVDFVNVNRSAELNHLTISNGPLIFIGEWVAEWQVQSGSKEDYKRFGEAQLEVYGRATFGWSYWTLKNFNNHNS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 513 Download |
| MKSISQIRFF ISLCFLFGVS NGRLMTDSKI RAVNLGGWLV TEGWIKPSLF DGIPNKDFLD 60 GTELQLKSVT VGKYLCAENG GGSIVVANRA SASGWESFRL WRKNEKTFGF RVFNGQFISA 120 GANGILEAMA STDKDKFEIV RSSSDPNRIR IKAANGLFMQ VKTEELVTAD NKGEGDWGDQ 180 DPSVFLMRIS RRLQGEFQVT NGYGPRVAPR VMREHWNTFI VEEDFKFISK NRLNSVRIPV 240 GWWIASDPRP PKPFVGGSLN ALDKAFCWAE KYGLKVILDL HAAPGSQNGF EHSSSRDGSQ 300 EWGLTDKNIQ QTVRVIDFLS ARYAKSRSLY AVELINEPMS PGVSLANVEK YYQAGYNAVR 360 RHSLTAYVVL SNGLGDSQPR ELFTLASELK GAVIDVHYYN LFSSVFDDLT VQQNVDFVNV 420 NRSAELNHLT ISNGPLIFIG EWVAEWQVQS GSKEDYKRFG EAQLEVYGRA TFGWSYWTLK 480 NFNNHNSGDG QSWLMGYPTH HRSDNKTTSF CP* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06268 | Fascin | 0.008 | 71 | 175 | 106 | + Fascin domain. This family consists of several eukaryotic fascin or singed proteins. The fascins are a structurally unique and evolutionarily conserved group of actin cross-linking proteins. Fascins function in the organisation of two major forms of actin-based structures: dynamic, cortical cell protrusions and cytoplasmic microfilament bundles. The cortical structures, which include filopodia, spikes, lamellipodial ribs, oocyte microvilli and the dendrites of dendritic cells, have roles in cell-matrix adhesion, cell interactions and cell migration, whereas the cytoplasmic actin bundles appear to participate in cell architecture. Dictyostelium hisactophilin, another actin-binding protein, is a submembranous pH sensor that signals slight changes of the H+ concentration to actin by inducing actin polymerisation and binding to microfilaments only at pH values below seven. Members of this family are histidine rich, typically contain the repeated motif of HHXH. | ||
| cd00257 | Fascin | 8.0e-7 | 66 | 177 | 114 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 4.0e-9 | 201 | 483 | 292 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 2.0e-25 | 215 | 511 | 333 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030674 | protein binding, bridging |
| GO:0051015 | actin filament binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001064458.1 | 0 | 11 | 485 | 13 | 494 | Os10g0370500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002285806.1 | 0 | 1 | 485 | 1 | 494 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002440848.1 | 0 | 30 | 485 | 64 | 523 | hypothetical protein SORBIDRAFT_09g008170 [Sorghum bicolor] |
| RefSeq | XP_002464704.1 | 0 | 30 | 485 | 43 | 500 | hypothetical protein SORBIDRAFT_01g024390 [Sorghum bicolor] |
| RefSeq | XP_002513884.1 | 0 | 1 | 485 | 6 | 492 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 2e-34 | 196 | 483 | 45 | 363 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 3n9k_A | 2e-34 | 196 | 483 | 50 | 368 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
| PDB | 1eqc_A | 3e-34 | 196 | 483 | 45 | 363 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
