Basic Information | |
---|---|
Species | Linum usitatissimum |
Cazyme ID | Lus10037071 |
Family | CBM43 |
Protein Properties | Length: 222 Molecular Weight: 21024.5 Isoelectric Point: 6.4446 |
Chromosome | Chromosome/Scaffold: 462 Start: 104900 End: 106162 |
Description | plasmodesmata callose-binding protein 3 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 23 | 105 | 1.3e-29 |
CLCKDGVAEQALQKAIDYACGAGADCTPILQNGACFQPNTVKDHCNYAVNSYFQRKGQAAGTCDFSGSATPSVSPPTGVTSTC |
Full Sequence |
---|
Protein Sequence Length: 222 Download |
MAVALAFLVM FLAITGHTTA NYCLCKDGVA EQALQKAIDY ACGAGADCTP ILQNGACFQP 60 NTVKDHCNYA VNSYFQRKGQ AAGTCDFSGS ATPSVSPPTG VTSTCVFPAS PGNAGTSPGT 120 GTGMVPGTGT GTGTVPGAGT GTGTGTGTGG TGTGTGTGTG TGTGTGMVPG STTGTPSVFG 180 TGSGLGPTGS GLGDGSGVSQ KVANLIIIFA SSCLTLLVSG L* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 9.0e-22 | 22 | 92 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-32 | 22 | 107 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU14053.1 | 0 | 5 | 116 | 4 | 114 | unknown [Glycine max] |
GenBank | ACU19899.1 | 0 | 1 | 118 | 1 | 116 | unknown [Glycine max] |
GenBank | ACU20773.1 | 0 | 1 | 116 | 1 | 114 | unknown [Glycine max] |
EMBL | CBI27282.1 | 0 | 1 | 110 | 1 | 109 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002311337.1 | 0 | 1 | 219 | 1 | 177 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-17 | 22 | 109 | 13 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |