| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10037257 |
| Family | AA3 |
| Protein Properties | Length: 695 Molecular Weight: 76263.4 Isoelectric Point: 7.5271 |
| Chromosome | Chromosome/Scaffold: 462 Start: 1018758 End: 1022402 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 154 | 674 | 0 |
| NTNLPTNTVTDSLQKSGFQVSATTTGTINIKCDAVVVGSGSGGGVVAGMLANAGYKVLVLEKGSYFARNNLSLLEGPSMDQMYLSGGLRATNDMSFVVLA GSTVGGGSAINWSASIKTPHKVTKEWSHEYQLELFESKTYREAMEVVCQRMGVHTKVDVVEGLNNAVLRKGCQQLGYPVDDIPRNSDAKHSCGWCCFGCK EGRKMGTSETWLVDLVNSGNGVILPGCEAVKVLHESRNGRKIATGAVFESMTKEIFMVESKVTVVACGALSTPPLLRRSGLKNRHIGENLHLHPVTMAWG YFPDEEVWKQKSYDGPIMTAMSKVSPEDESEDDDGLYGAIIQTPSLHPGMFSSFMPWVSGSDLKRRMTRFSRTAHIFTLVRDRGSGAVKDCSDNISYEME ESDERNLQKGVEKILRILAAAGAEEMGTHNLGGKSINVKEVGSEELERFVKEESRRPIRGLRTQLGSAHQMGSCRMGVDPAVSAVKETGETWEVEGLYVA DSSVFPTALGVNPMVTVQAIA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 695 Download |
| MAGTPQRIGR LVGGRLEHPK IWLVRLALWL LSTWIGTFIL CGRLSISSRF PFLSSFPEIP 60 LETREQIVLS WSQSIFFHLR MLFKAFKLLI PLIFFSQVDE KIENPTWEAI GYPGSDPAYK 120 PEQQHPSNEL LAAAANITTT KEHPYGPLHR GIINTNLPTN TVTDSLQKSG FQVSATTTGT 180 INIKCDAVVV GSGSGGGVVA GMLANAGYKV LVLEKGSYFA RNNLSLLEGP SMDQMYLSGG 240 LRATNDMSFV VLAGSTVGGG SAINWSASIK TPHKVTKEWS HEYQLELFES KTYREAMEVV 300 CQRMGVHTKV DVVEGLNNAV LRKGCQQLGY PVDDIPRNSD AKHSCGWCCF GCKEGRKMGT 360 SETWLVDLVN SGNGVILPGC EAVKVLHESR NGRKIATGAV FESMTKEIFM VESKVTVVAC 420 GALSTPPLLR RSGLKNRHIG ENLHLHPVTM AWGYFPDEEV WKQKSYDGPI MTAMSKVSPE 480 DESEDDDGLY GAIIQTPSLH PGMFSSFMPW VSGSDLKRRM TRFSRTAHIF TLVRDRGSGA 540 VKDCSDNISY EMEESDERNL QKGVEKILRI LAAAGAEEMG THNLGGKSIN VKEVGSEELE 600 RFVKEESRRP IRGLRTQLGS AHQMGSCRMG VDPAVSAVKE TGETWEVEGL YVADSSVFPT 660 ALGVNPMVTV QAIAYCTGLS VLERLRRKKL CSEL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 2.0e-6 | 597 | 660 | 66 | + choline dehydrogenase; Validated | ||
| pfam05199 | GMC_oxred_C | 6.0e-23 | 547 | 675 | 129 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 7.0e-38 | 203 | 675 | 527 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 4.0e-71 | 232 | 448 | 222 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29206.1 | 0 | 1 | 685 | 75 | 644 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_193673.2 | 0 | 3 | 689 | 39 | 726 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002269629.1 | 0 | 1 | 689 | 75 | 787 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328753.1 | 0 | 1 | 689 | 43 | 745 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519938.1 | 0 | 7 | 689 | 7 | 709 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.0002 | 184 | 434 | 17 | 281 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 1kdg_B | 0.0005 | 186 | 461 | 9 | 296 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
| PDB | 1kdg_A | 0.0005 | 186 | 461 | 9 | 296 | A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose Dehydrogenase |
| PDB | 1naa_B | 0.0005 | 186 | 461 | 4 | 291 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
| PDB | 1naa_A | 0.0005 | 186 | 461 | 4 | 291 | A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex With Cellobionolactam |
