Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10037774 |
Family | CE8 |
Protein Properties | Length: 359 Molecular Weight: 40218.6 Isoelectric Point: 8.4501 |
Chromosome | Chromosome/Scaffold: 196 Start: 1495717 End: 1497868 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 62 | 347 | 0 |
IMVDINGEAEHKSIQSAIDAVPLMNSQWVIIHIRKGIYREKVHIPANKPYIFLRGNGKGKTHIVWSQSATNNLDSATFILDSPNFIAFGISFHNDAPVGE AFTSQNQSVAAFVGHDRAAFYHCAFYSNHNSLHDYKGRHYYDHCYIQGSIDFIFGRARSIFQTCEIFVIADFRVHIHGSITAQHREYQDESGFVFIKGKV YGIGEVYLGRAKGAYSRVVFCKTYLSRTITPEGWSNWSYTGSTDKLFQAEYKCHGPGAATDKRVPWAKQLTEKEAEEFMSIDFIDG |
Full Sequence |
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Protein Sequence Length: 359 Download |
MAFISPPSMT SFHTVMSSST VALLVAALWI SSNHQLQANA EATSAVIDAP LLTKKIGTNR 60 TIMVDINGEA EHKSIQSAID AVPLMNSQWV IIHIRKGIYR EKVHIPANKP YIFLRGNGKG 120 KTHIVWSQSA TNNLDSATFI LDSPNFIAFG ISFHNDAPVG EAFTSQNQSV AAFVGHDRAA 180 FYHCAFYSNH NSLHDYKGRH YYDHCYIQGS IDFIFGRARS IFQTCEIFVI ADFRVHIHGS 240 ITAQHREYQD ESGFVFIKGK VYGIGEVYLG RAKGAYSRVV FCKTYLSRTI TPEGWSNWSY 300 TGSTDKLFQA EYKCHGPGAA TDKRVPWAKQ LTEKEAEEFM SIDFIDGKQW LPVWLQNK* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02671 | PLN02671 | 2.0e-83 | 48 | 351 | 319 | + pectinesterase | ||
PLN02497 | PLN02497 | 9.0e-90 | 60 | 351 | 296 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 3.0e-90 | 62 | 351 | 297 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 6.0e-95 | 60 | 352 | 304 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 0 | 22 | 355 | 334 | + Probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU23222.1 | 0 | 5 | 355 | 3 | 346 | unknown [Glycine max] |
RefSeq | NP_188331.1 | 0 | 21 | 358 | 11 | 343 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002272939.1 | 0 | 4 | 355 | 1 | 348 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311381.1 | 0 | 4 | 354 | 3 | 341 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523016.1 | 0 | 36 | 355 | 29 | 350 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 2.99878e-43 | 56 | 351 | 5 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-32 | 67 | 351 | 10 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 0.00000000000003 | 73 | 353 | 19 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.00000000000003 | 73 | 353 | 19 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 0.0000000000001 | 73 | 353 | 19 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |