y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10037846 |
Family | GH14 |
Protein Properties | Length: 544 Molecular Weight: 60786.8 Isoelectric Point: 5.7644 |
Chromosome | Chromosome/Scaffold: 475 Start: 49073 End: 51836 |
Description | beta-amylase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 133 | 367 | 0 |
QLNVIDMNCQLIDRDGLTNYLKILKSAGVDGVMVDCWWGIVEGDAPQVYNWSGYKELFKIVRDLKLKLQAVMSFHECGGNVGDDVFIPLPRWVIEIGESN PDIYFTDRGGRRNNECLTWGIDKERVLKSRTALEVYFDYMRSFRVECDEFFQDGIISEIEVGLGPCGELRYPSYPAKHGWRYPGIGEFQCYDKYLMKSLG KAAEIRGHSFWGGAPGNAGSYNSPPHETGFFRDGD | |||
GH14 | 367 | 526 | 0 |
DHGDRVLALANLAFEGTKISAKLSGIHWWYKTASHAAELTAGFYNPSNRDGYAPIATMLKKHGITLNFTCFEMRTLDQFEGFPEAMADPEGLVWQVLNAA WDVSLPVASENALPCYDREGYNKILENAKPLHDPDGRHLSAFTYLRHSSALIERRNFEEF |
Full Sequence |
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Protein Sequence Length: 544 Download |
MPISAGRLAD GFRSCGLASA GLTPRSPFVS PSRGSLSQSS SWLRLDHDAG RLAFDGRPRK 60 SAVVIGSGKT IGDHPSVDES ADDSTDDDEQ VLEVRPKVPE RDFTGTAYVP VYVMLPLTVC 120 VTYFLGLGWW GWQLNVIDMN CQLIDRDGLT NYLKILKSAG VDGVMVDCWW GIVEGDAPQV 180 YNWSGYKELF KIVRDLKLKL QAVMSFHECG GNVGDDVFIP LPRWVIEIGE SNPDIYFTDR 240 GGRRNNECLT WGIDKERVLK SRTALEVYFD YMRSFRVECD EFFQDGIISE IEVGLGPCGE 300 LRYPSYPAKH GWRYPGIGEF QCYDKYLMKS LGKAAEIRGH SFWGGAPGNA GSYNSPPHET 360 GFFRDGDHGD RVLALANLAF EGTKISAKLS GIHWWYKTAS HAAELTAGFY NPSNRDGYAP 420 IATMLKKHGI TLNFTCFEMR TLDQFEGFPE AMADPEGLVW QVLNAAWDVS LPVASENALP 480 CYDREGYNKI LENAKPLHDP DGRHLSAFTY LRHSSALIER RNFEEFGRFV KRMHGMPSLL 540 VPY* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 1.0e-140 | 109 | 533 | 453 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 2.0e-156 | 109 | 533 | 452 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 90 | 535 | 466 | + beta-amylase | ||
PLN02705 | PLN02705 | 0 | 93 | 535 | 466 | + beta-amylase | ||
PLN02801 | PLN02801 | 0 | 108 | 534 | 453 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40368.1 | 0 | 61 | 539 | 173 | 653 | unnamed protein product [Vitis vinifera] |
EMBL | CBI40370.1 | 0 | 16 | 535 | 20 | 540 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274612.1 | 0 | 16 | 535 | 20 | 566 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002320794.1 | 0 | 102 | 535 | 1 | 437 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511858.1 | 0 | 28 | 535 | 25 | 533 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1btc_A | 0 | 108 | 535 | 7 | 439 | A Chain A, Three-Dimensional Structure Of Soybean Beta-Amylase Determined At 3.0 Angstroms Resolution: Preliminary Chain Tracing Of The Complex With Alpha-Cyclodext |
PDB | 1wdp_A | 0 | 108 | 535 | 11 | 443 | A Chain A, Three-Dimensional Structure Of Soybean Beta-Amylase Determined At 3.0 Angstroms Resolution: Preliminary Chain Tracing Of The Complex With Alpha-Cyclodext |
PDB | 1q6c_A | 0 | 108 | 535 | 11 | 443 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 108 | 535 | 11 | 443 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1byd_A | 0 | 108 | 535 | 11 | 443 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |