| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10037920 |
| Family | GT64 |
| Protein Properties | Length: 782 Molecular Weight: 87603.1 Isoelectric Point: 9.1113 |
| Chromosome | Chromosome/Scaffold: 475 Start: 351079 End: 354708 |
| Description | glycosyltransferase family protein 47 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT64 | 535 | 770 | 0 |
| FTLLTMTYDARLWNLKMYVKHYSRCASVKEIVVVWNKGIPPMVSDLDSAVPVRIRVEKENSLNNRFRKDPLIKTRAVLELDDDIMMPCDDVERGFNVWRQ HPDRIVGFYPRLISGNPLKYRAEKYARSHKGYNMILTGAAFVDAESAFDRYWGDKAKAGRELVDKYFNCEDVLLNYLYANASSGKTVEYVRPAWAIDTSK FSGAAISKNTQVHYGIRSRCLTRFTQMYGSLSDRKW | |||
| Full Sequence |
|---|
| Protein Sequence Length: 782 Download |
| MGVVVVSGPA TSAGGGGVGN GGGSSTAAGG SCCDMGMKCW CKWRLGSHQL FPYRFLSVFS 60 SGFLFLMGCL VVYALIGVIY GWVAFNNNPY VRFNSFGCLE DGEGSWSVGV FYGDSPFSLK 120 PIESVNVWKN ESKAWPVANP VITCASVSDA GFPSNFVADP FLYVQGETLF IFYETKNPFT 180 MQGDIGVAKS SDKGATWQQL GIALDEDWHL SYPYVFDYHG QIYMIPEGSL KGDLRLYRAL 240 EFPLQWTLEK ILIKKPLVDS TIINYDGQYW LFGSDHSGFG TKKNGQLEIW HSSSPLGPWK 300 PHKKNPIYNI DKKMGARNGG RPFLYNGNLY RFGQDCGETY GRRVRAFKVE TLTKKDYKEV 360 EVPLGFEESK KGRNAWNGAR YHHLDVQQLS SGEWIGVMDG DRVPSGDPSH RFIVGCASFA 420 SAAAVVIVLG LLLGAVKCII PLNWCAHYSG KRSDALLVWE RSNLFSSRVR RFCSRINRVP 480 TSIRGKIKYN TWAGRLVLAV IFVVGAVLMC TGVKNVYGGN GAEEAYPVNG QYSQFTLLTM 540 TYDARLWNLK MYVKHYSRCA SVKEIVVVWN KGIPPMVSDL DSAVPVRIRV EKENSLNNRF 600 RKDPLIKTRA VLELDDDIMM PCDDVERGFN VWRQHPDRIV GFYPRLISGN PLKYRAEKYA 660 RSHKGYNMIL TGAAFVDAES AFDRYWGDKA KAGRELVDKY FNCEDVLLNY LYANASSGKT 720 VEYVRPAWAI DTSKFSGAAI SKNTQVHYGI RSRCLTRFTQ MYGSLSDRKW EFDGRKDGWD 780 L* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd08994 | GH43_like_2 | 0.003 | 266 | 346 | 83 | + Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. | ||
| pfam09258 | Glyco_transf_64 | 1.0e-67 | 535 | 773 | 248 | + Glycosyl transferase family 64 domain. Members of this family catalyze the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analog of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0031227 | intrinsic to endoplasmic reticulum membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB85556.1 | 0 | 46 | 781 | 21 | 764 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_196070.2 | 0 | 46 | 781 | 22 | 765 | glycosyltransferase family protein 47 [Arabidopsis thaliana] |
| RefSeq | XP_002262646.1 | 0 | 91 | 781 | 66 | 756 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002315348.1 | 0 | 31 | 781 | 21 | 847 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532924.1 | 0 | 93 | 781 | 16 | 704 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1on8_B | 3e-23 | 527 | 765 | 22 | 270 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1on8_A | 3e-23 | 527 | 765 | 22 | 270 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1on6_B | 3e-23 | 527 | 765 | 22 | 270 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1on6_A | 3e-23 | 527 | 765 | 22 | 270 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 1omz_B | 3e-23 | 527 | 765 | 22 | 270 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
