Basic Information | |
---|---|
Species | Linum usitatissimum |
Cazyme ID | Lus10038075 |
Family | GH9 |
Protein Properties | Length: 486 Molecular Weight: 54040.4 Isoelectric Point: 6.686 |
Chromosome | Chromosome/Scaffold: 475 Start: 1271526 End: 1273950 |
Description | glycosyl hydrolase 9A4 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH9 | 28 | 474 | 0 |
DYKDALTKSLIFLEAQRSGKLPPTNRLPWRGDSALDDGKVENVDLVGGYYDAGDNVKYGLPMAFTVTTLAMNAVFYHKELQQAGEWQNTMDAIKWGTDFF LKACSKRNKLYVQVGDPVKDHQCWVRPENMQTPRPVLQIHENDPGSEIAAEVAAAFASSSMVFRSVNKTYARQLLNKAKTMFLFAKSHKATFDGECPFYC SFSGYNDELMWGATWLYMATRNETYLKYLKEDAISGCVAEFSWDLKYAGVHILLAKLFFEGEKSFEQYKGQADSFICSNLPESPYHQVHITPGGMIHLRD GANSQYVTGTANLFAIYSDILRQFNQKVCCGPKQFDAEALLGFARQQMDYLLGNNPEKRSYMVGFGNNPPVQAHHRGASIPCNALADVSCPMSFVEYFNK DTPNPNELTGAILGGPDKNDKFVDKRWESCYTEPCTYVNSLAVGALA |
Full Sequence |
---|
Protein Sequence Length: 486 Download |
MTMRSDVAAA IIALVVATSF VCVNAHFDYK DALTKSLIFL EAQRSGKLPP TNRLPWRGDS 60 ALDDGKVENV DLVGGYYDAG DNVKYGLPMA FTVTTLAMNA VFYHKELQQA GEWQNTMDAI 120 KWGTDFFLKA CSKRNKLYVQ VGDPVKDHQC WVRPENMQTP RPVLQIHEND PGSEIAAEVA 180 AAFASSSMVF RSVNKTYARQ LLNKAKTMFL FAKSHKATFD GECPFYCSFS GYNDELMWGA 240 TWLYMATRNE TYLKYLKEDA ISGCVAEFSW DLKYAGVHIL LAKLFFEGEK SFEQYKGQAD 300 SFICSNLPES PYHQVHITPG GMIHLRDGAN SQYVTGTANL FAIYSDILRQ FNQKVCCGPK 360 QFDAEALLGF ARQQMDYLLG NNPEKRSYMV GFGNNPPVQA HHRGASIPCN ALADVSCPMS 420 FVEYFNKDTP NPNELTGAIL GGPDKNDKFV DKRWESCYTE PCTYVNSLAV GALAKLAGCS 480 PPPHH* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02171 | PLN02171 | 3.0e-152 | 18 | 478 | 478 | + endoglucanase | ||
PLN02266 | PLN02266 | 7.0e-158 | 25 | 477 | 465 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 4.0e-158 | 28 | 474 | 461 | + Glycosyl hydrolase family 9. | ||
PLN02613 | PLN02613 | 1.0e-172 | 28 | 478 | 455 | + endoglucanase | ||
PLN02909 | PLN02909 | 0 | 21 | 477 | 458 | + Endoglucanase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN82881.1 | 0 | 27 | 477 | 13 | 464 | hypothetical protein [Vitis vinifera] |
EMBL | CBI20730.1 | 0 | 1 | 470 | 3 | 475 | unnamed protein product [Vitis vinifera] |
EMBL | CBI20730.1 | 0 | 27 | 479 | 516 | 969 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189972.2 | 0 | 7 | 477 | 12 | 484 | AtGH9A4 (Arabidopsis thaliana Glycosyl Hydrolase 9A4); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
RefSeq | XP_002516149.1 | 0 | 24 | 477 | 27 | 481 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 27 | 476 | 3 | 428 | A Chain A, Elucidation Of The Substrate Specificity And Protein Structure Of Abfb, A Family 51 Alpha-L-Arabinofuranosidase From Bifidobacterium Longum. |
PDB | 1ksc_A | 0 | 27 | 476 | 3 | 428 | A Chain A, Elucidation Of The Substrate Specificity And Protein Structure Of Abfb, A Family 51 Alpha-L-Arabinofuranosidase From Bifidobacterium Longum. |
PDB | 1ks8_A | 0 | 27 | 476 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 27 | 476 | 4 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 27 | 476 | 4 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |