Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10038099 |
Family | GH17 |
Protein Properties | Length: 427 Molecular Weight: 47187.1 Isoelectric Point: 6.9224 |
Chromosome | Chromosome/Scaffold: 475 Start: 1540814 End: 1542576 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 33 | 349 | 0 |
GINYGRIADNIPSPDDVVRLLRLAKIRNVRIYDADHSVLNAFRGTGLKLVIGLPNGYLKDMSSNASNAMSWVKENVERFMPNSDICGIAIGNEVLGGGDV ELYGALLGAAKNVHSALNKLGLSDTVQISTAHSQAVFSNSYPPSSCVFRENIAQYMKPLMQFFWETGSPFCLNVYPFLAYMSDPENIDINYALFQKTKGI YDPKTDLYYDNMLDAQIDATYAALENAGFDKMEVIVTETGWASRGDNNEAAATVENARTYNFNLRKRLAKKKGTPMRPKNIVKAYVFAIFNENLKPGPTS ERNFGLFKPDGSISYDV |
Full Sequence |
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Protein Sequence Length: 427 Download |
MASHHHRLVL FLLLLCFSPT PSLADSAFIG TYGINYGRIA DNIPSPDDVV RLLRLAKIRN 60 VRIYDADHSV LNAFRGTGLK LVIGLPNGYL KDMSSNASNA MSWVKENVER FMPNSDICGI 120 AIGNEVLGGG DVELYGALLG AAKNVHSALN KLGLSDTVQI STAHSQAVFS NSYPPSSCVF 180 RENIAQYMKP LMQFFWETGS PFCLNVYPFL AYMSDPENID INYALFQKTK GIYDPKTDLY 240 YDNMLDAQID ATYAALENAG FDKMEVIVTE TGWASRGDNN EAAATVENAR TYNFNLRKRL 300 AKKKGTPMRP KNIVKAYVFA IFNENLKPGP TSERNFGLFK PDGSISYDVG YKGLKSSSAD 360 SIVLSLKVID LHVPACYINM NGHMLELFVA CLPSLVKRLN EVDQLFSQAT VFMVFTCSAV 420 FCSYDF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 7.0e-6 | 18 | 342 | 337 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-96 | 33 | 351 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY25165.1 | 0 | 26 | 367 | 27 | 368 | beta-1,3-glucanase 1 [Ziziphus jujuba] |
RefSeq | NP_565627.1 | 0 | 25 | 385 | 27 | 386 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002282272.1 | 0 | 10 | 369 | 11 | 368 | PREDICTED: similar to beta-1,3-glucanase 1 [Vitis vinifera] |
RefSeq | XP_002308978.1 | 0 | 26 | 359 | 3 | 336 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325214.1 | 0 | 23 | 353 | 8 | 338 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 33 | 351 | 3 | 315 | A Chain A, Crystal Structures Of Hevamine, A Plant Defence Protein With Chitinase And Lysozyme Activity, And Its Complex With An Inhibitor |
PDB | 3f55_C | 0 | 33 | 351 | 3 | 315 | A Chain A, Crystal Structures Of Hevamine, A Plant Defence Protein With Chitinase And Lysozyme Activity, And Its Complex With An Inhibitor |
PDB | 3f55_B | 0 | 33 | 351 | 3 | 315 | A Chain A, Crystal Structures Of Hevamine, A Plant Defence Protein With Chitinase And Lysozyme Activity, And Its Complex With An Inhibitor |
PDB | 3f55_A | 0 | 33 | 351 | 3 | 315 | A Chain A, Crystal Structures Of Hevamine, A Plant Defence Protein With Chitinase And Lysozyme Activity, And Its Complex With An Inhibitor |
PDB | 3em5_D | 0 | 33 | 351 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |