| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10038211 |
| Family | CBM43 |
| Protein Properties | Length: 496 Molecular Weight: 54659 Isoelectric Point: 9.3859 |
| Chromosome | Chromosome/Scaffold: 28 Start: 273821 End: 275803 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 374 | 458 | 8e-28 |
| WCVVGETATNTTAVVEALSWACSQGKGLCDPIQPGGKCFKPDSVSWHASYAFSAYWAEFKKAGGTCSFNGLAALTVKDPSVGECK | |||
| GH17 | 25 | 346 | 0 |
| VGINYGQLGNNLPSPARSVHLIKSLKAKRVKIYDANPKILRAFKGTDLQLSIMVPNELIPNVSASQSFSDRWVLTNVVPFYPATKIRYLLVGNEILTNPD IGTWFNLVPAMRRIKLSLHKFRLHKIKVSTPHATNVLESSFPPSNGTFRSDVAVPIMKPMLQFLNRTRSFFFLDVYPFFPWSADPKKNRLDYALLQPSNF TYTDPVSKLTYTNLFDQIVDATIFAMKRLGYPDIRIFIAETGWPSAGDIDQIGANIHNAAVYNRNIVKKLTAKPAIGTPARPGVVIPSIIFALYNENQKP GQGTERHFGLLYPNGTALYEID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 496 Download |
| MKNLFFFLIL ALFLSFSGAE ISSRVGINYG QLGNNLPSPA RSVHLIKSLK AKRVKIYDAN 60 PKILRAFKGT DLQLSIMVPN ELIPNVSASQ SFSDRWVLTN VVPFYPATKI RYLLVGNEIL 120 TNPDIGTWFN LVPAMRRIKL SLHKFRLHKI KVSTPHATNV LESSFPPSNG TFRSDVAVPI 180 MKPMLQFLNR TRSFFFLDVY PFFPWSADPK KNRLDYALLQ PSNFTYTDPV SKLTYTNLFD 240 QIVDATIFAM KRLGYPDIRI FIAETGWPSA GDIDQIGANI HNAAVYNRNI VKKLTAKPAI 300 GTPARPGVVI PSIIFALYNE NQKPGQGTER HFGLLYPNGT ALYEIDLSGE TPLSGYKKPL 360 PPPTNNEPYT GKLWCVVGET ATNTTAVVEA LSWACSQGKG LCDPIQPGGK CFKPDSVSWH 420 ASYAFSAYWA EFKKAGGTCS FNGLAALTVK DPSVGECKVP SGRLQLVGGN KNDCEGETDI 480 LLSVGEMIDI LEADF* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 1.0e-13 | 373 | 445 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 9.0e-28 | 373 | 458 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 7.0e-108 | 25 | 346 | 323 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA89481.1 | 0 | 4 | 464 | 19 | 478 | beta-1,3-glucanase [Salix gilgiana] |
| EMBL | CBI39470.1 | 0 | 8 | 461 | 12 | 464 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002303070.1 | 0 | 12 | 464 | 10 | 461 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002334812.1 | 0 | 10 | 464 | 12 | 465 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002534357.1 | 0 | 77 | 464 | 1 | 387 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 25 | 347 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 25 | 347 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 25 | 347 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghr_A | 0 | 25 | 347 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1aq0_B | 0 | 25 | 347 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
