y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10038440 |
Family | AA7 |
Protein Properties | Length: 544 Molecular Weight: 61961.7 Isoelectric Point: 9.5225 |
Chromosome | Chromosome/Scaffold: 28 Start: 1319763 End: 1323183 |
Description | FAD-binding Berberine family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA7 | 2 | 308 | 3.2e-29 |
GEDLFWAIRGGGGASFGVVIAYKIKLVLVPATVTVFRVEKYQEQNATDMVYKWQFVAPKTTDDLFMRMLLQPVSSKTKKGTLTVRASILAEYLGTADTLV ALMSNEFPELGLKKSDCLEMSWIQSVLWWGLNNNQTNPEVLTSRVPESVNFGKRKSDYVRNPISKPNLEWIWKKMVESGKTGFVFNPYGGRMDEIGETET PFPHRKGNLWKIQYSISWKDAGEKAEKDYLSQIRRIYSYMTPFVSKNPRGAYLNYRDLDIGTGQPGKDSYNDGKVYGDKYFTVNFDRLVKVKTAVDPGNF FWNEQSI |
Full Sequence |
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Protein Sequence Length: 544 Download |
MGEDLFWAIR GGGGASFGVV IAYKIKLVLV PATVTVFRVE KYQEQNATDM VYKWQFVAPK 60 TTDDLFMRML LQPVSSKTKK GTLTVRASIL AEYLGTADTL VALMSNEFPE LGLKKSDCLE 120 MSWIQSVLWW GLNNNQTNPE VLTSRVPESV NFGKRKSDYV RNPISKPNLE WIWKKMVESG 180 KTGFVFNPYG GRMDEIGETE TPFPHRKGNL WKIQYSISWK DAGEKAEKDY LSQIRRIYSY 240 MTPFVSKNPR GAYLNYRDLD IGTGQPGKDS YNDGKVYGDK YFTVNFDRLV KVKTAVDPGN 300 FFWNEQSIPV LPRTVTVFDK EKDPSESLSD FVYRWQFVAP NASNDLFMRL HLSQTTASIQ 360 ALYLGKADEV VSLLNKDFPE LRLTTEDCKE MSWIQSVLWY GTPDYGKSPD ALLNRYTVSP 420 SNPGKSAKRK SDFVVNPVSR EGVDRIINRL VQLPKIKMTL SPYGGKVSEI PEWKGLFPHR 480 KGNLYMGAYV GNWDARGGGC RRRGERVKEY VRLYGRVRVE ESEEGVLELP GSRHWEDGAW 540 GWL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam08031 | BBE | 8.0e-16 | 252 | 309 | 58 | + Berberine and berberine like. This domain is found in the berberine bridge and berberine bridge- like enzymes which are involved in the biosynthesis of numerous isoquinoline alkaloids. They catalyze the transformation of the N-methyl group of (S)-reticuline into the C-8 berberine bridge carbon of (S)-scoulerine. |
Gene Ontology | |
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GO Term | Description |
GO:0016491 | oxidoreductase activity |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002268606.1 | 0 | 1 | 311 | 226 | 531 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299028.1 | 0 | 1 | 312 | 224 | 533 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002299028.1 | 1.4013e-45 | 311 | 497 | 253 | 444 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002317087.1 | 0 | 1 | 313 | 224 | 533 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002317087.1 | 1.4013e-45 | 308 | 497 | 251 | 443 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3tsj_B | 0 | 1 | 311 | 196 | 496 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
PDB | 3tsj_B | 1e-27 | 303 | 500 | 218 | 411 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
PDB | 3tsj_A | 0 | 1 | 311 | 196 | 496 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
PDB | 3tsj_A | 1e-27 | 303 | 500 | 218 | 411 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
PDB | 3tsh_A | 0 | 1 | 311 | 196 | 496 | A Chain A, Crystal Structure Of Phl P 4, A Grass Pollen Allergen With Glucose Dehydrogenase Activity |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FC896393 | 309 | 1 | 309 | 0 |
DY275452 | 309 | 1 | 309 | 0 |
DT505228 | 297 | 17 | 313 | 0 |
FC896393 | 194 | 308 | 493 | 2.99878e-43 |
DY275452 | 194 | 308 | 493 | 4.99983e-42 |
Sequence Alignments (This image is cropped. Click for full image.) |
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