| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10038469 |
| Family | GH116 |
| Protein Properties | Length: 247 Molecular Weight: 27669.5 Isoelectric Point: 6.2792 |
| Chromosome | Chromosome/Scaffold: 28 Start: 1490328 End: 1491338 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 33 | 132 | 9.6e-38 |
| TYALACGLLPIVDKAKAQSALEKVFNFNVMKVKDGKRGAVNGMLPDGTVDMLNTQSREIWSGVTYAVAASMIQEGLTDMGFKTASGVYQTSWSERGLGFD | |||
| Full Sequence |
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| Protein Sequence Length: 247 Download |
| MENYGTGPTS ITTTVVVETV NRFKLISSLD SGTYALACGL LPIVDKAKAQ SALEKVFNFN 60 VMKVKDGKRG AVNGMLPDGT VDMLNTQSRE IWSGVTYAVA ASMIQEGLTD MGFKTASGVY 120 QTSWSERGLG FDIFHGASDH PSSAIYWVHM LFLDRYGFQT PEAWNTDDQY RSLCYMRPLA 180 IWAMQWEFSR KKLEQQEMKG PVMEDYPFAE DAGFAKVARF LRLPELNQSK SLFQTVYDYA 240 SKKLGY* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 3.0e-14 | 34 | 164 | 134 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 6.0e-50 | 34 | 186 | 153 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN61857.1 | 0 | 34 | 244 | 329 | 515 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002264575.1 | 0 | 34 | 244 | 762 | 947 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328722.1 | 0 | 34 | 244 | 734 | 922 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331126.1 | 0 | 34 | 246 | 760 | 947 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528846.1 | 0 | 34 | 246 | 764 | 951 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| JG240063 | 183 | 65 | 247 | 0 |
| DN486901 | 213 | 34 | 246 | 0 |
| DN490633 | 205 | 42 | 246 | 0 |
| CO103828 | 211 | 34 | 244 | 0 |
| DB896394 | 199 | 48 | 246 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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