| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10038471 |
| Family | GH116 |
| Protein Properties | Length: 967 Molecular Weight: 108369 Isoelectric Point: 7.5396 |
| Chromosome | Chromosome/Scaffold: 28 Start: 1495217 End: 1500268 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 519 | 852 | 0 |
| GQFLYLEGIEYLMWNTYDVHFYSSFALVMLFPKLQLSVQRDFAAAVRMHDPSKMVVLHDGRWVPRKALGAVPHDIGLHDPWFEVNAYCLYNTDRWKDLNL KFVLQVYRDVVATGDKKFAKAVWPSVYMAVAFMDQFDKDRDGMIENEGFPDQTYDTWTVSGVSAYTGGLWVAALQAASALAGLVGDKGSQVHFWFKFQKA KSVYGKLWNGSYFDYDNSGSRNSKSIQADQLAGQWYALACGLLPIVDKAKAQSALEKVFNFNVMKVKDGKRGAVNGMLPDGTVDMLNTQSREIWSGVTYA VAASMIQEGLTDMGFKTASGVYQTSWSERGLGFD | |||
| Full Sequence |
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| Protein Sequence Length: 967 Download |
| MVENGDRNNV ASKKSENKVD PGKPAILTWQ RKLNTQLTRL RQFRLTLNET VQLTPMCFRL 60 ERYKREEIAK GRDGFFINPF GKRHITSSHG VPLGGIGSGS IGRSFRGEFQ RWQLSPGMCE 120 GAPVLANQFS AFVSRSNGRK YSSVLCPRGP DMIIELTIAL LRDPAVSGIG SWDWKLKGDK 180 STYDALYPRA WTTYEGEPDP QLKIVCRQLS PVIPHNYKES SYPVAVFTFT LHNTGQTAAD 240 ASLLFTWANS VGGDSGSSGQ HVNSTETRED GVHCILLHHR TAKESPMTFA IAAQESTGVR 300 VSKCPRFMIS GNFEGGVSAK DMWDHIKKHG TFDNLKRATE VSQPSEPGSS IGAGIAATAT 360 LQPDEVRTIT FSLAWDCPEA NFQGGRTYHR RYTKFFGAHG NAAANIAHEA ILNHSHWESQ 420 IEEWQRPILE DKTFPECVDR HVELREVFYG SPPVHNLETL GDRKFSLDNP GVVLETKRSV 480 TASSMLDSMA SKLRQIHTPV ASNSAIGTNL LDEGEENIGQ FLYLEGIEYL MWNTYDVHFY 540 SSFALVMLFP KLQLSVQRDF AAAVRMHDPS KMVVLHDGRW VPRKALGAVP HDIGLHDPWF 600 EVNAYCLYNT DRWKDLNLKF VLQVYRDVVA TGDKKFAKAV WPSVYMAVAF MDQFDKDRDG 660 MIENEGFPDQ TYDTWTVSGV SAYTGGLWVA ALQAASALAG LVGDKGSQVH FWFKFQKAKS 720 VYGKLWNGSY FDYDNSGSRN SKSIQADQLA GQWYALACGL LPIVDKAKAQ SALEKVFNFN 780 VMKVKDGKRG AVNGMLPDGT VDMLNTQSRE IWSGVTYAVA ASMIQEGLTD MGFKTASGVY 840 QTSWSERGLG FDIFHGASDH PSSAIYWVHM LFLDRYGFQT PEAWNTDDQY RSLCYMRPLA 900 IWAMQWEFSR KKLEQQEMKG PVMEDYPFAE DAGFAKVARF LRLPELNQSK SLFQTVYDYA 960 SKKLGY* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 1.0e-15 | 163 | 436 | 293 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 3.0e-50 | 90 | 393 | 313 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 2.0e-62 | 518 | 884 | 385 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 3.0e-157 | 519 | 906 | 393 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_199801.2 | 0 | 15 | 964 | 19 | 955 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002264575.1 | 0 | 2 | 964 | 6 | 947 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328722.1 | 0 | 18 | 964 | 1 | 922 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331126.1 | 0 | 17 | 966 | 24 | 947 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528846.1 | 0 | 18 | 966 | 24 | 951 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JG703027 | 353 | 537 | 889 | 0 |
| DY292040 | 384 | 532 | 912 | 0 |
| FC917648 | 306 | 532 | 837 | 0 |
| DY967129 | 298 | 489 | 786 | 0 |
| JG704091 | 324 | 566 | 889 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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