Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10038501 |
Family | GH17 |
Protein Properties | Length: 355 Molecular Weight: 39127.2 Isoelectric Point: 4.5124 |
Chromosome | Chromosome/Scaffold: 28 Start: 1655232 End: 1656506 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 23 | 339 | 0 |
LGINYGQIGNNLPHPSTAVDLLTSLRITKARIYDTNPQILTAFANSQIDLVVTVENQMLSTLMDPEQALQWVTAHVKPYVRSTRITGIAVGNEVFTDDDD TLLNYLVPAMVNIHSALVQLGIDRNIEVSTPHSLAVLETSYPPSAGEFKSEVASDMTKFLQFLNATNSPFWINAYTYFAYKDDPTGISLDYVLFNPNPGM DDPSTGLHYDNMLYAQVDAVIFAISKLGYGGIEVRVSETGWPSNGDADEVGATVQNAASYNRNLLRRQLANQGTPLRPRARLEVYLFALFNEDMKPGPTS ERNYGLYQPDCSMVYNV |
Full Sequence |
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Protein Sequence Length: 355 Download |
MDAPFINFIF MFLIAAVGSV TSLGINYGQI GNNLPHPSTA VDLLTSLRIT KARIYDTNPQ 60 ILTAFANSQI DLVVTVENQM LSTLMDPEQA LQWVTAHVKP YVRSTRITGI AVGNEVFTDD 120 DDTLLNYLVP AMVNIHSALV QLGIDRNIEV STPHSLAVLE TSYPPSAGEF KSEVASDMTK 180 FLQFLNATNS PFWINAYTYF AYKDDPTGIS LDYVLFNPNP GMDDPSTGLH YDNMLYAQVD 240 AVIFAISKLG YGGIEVRVSE TGWPSNGDAD EVGATVQNAA SYNRNLLRRQ LANQGTPLRP 300 RARLEVYLFA LFNEDMKPGP TSERNYGLYQ PDCSMVYNVG LSSGRAFFRF FGGY* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.005 | 212 | 332 | 124 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 5.0e-92 | 23 | 339 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG52058.1 | 0 | 20 | 346 | 33 | 359 | AC022455_12 beta-1,3-glucanase precursor, putative; 75043-73120 [Arabidopsis thaliana] |
RefSeq | XP_002270153.1 | 0 | 20 | 340 | 31 | 351 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306003.1 | 0 | 20 | 341 | 1 | 322 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332000.1 | 0 | 20 | 343 | 31 | 354 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519678.1 | 0 | 20 | 340 | 21 | 340 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 23 | 342 | 2 | 316 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3f55_C | 0 | 23 | 342 | 2 | 316 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3f55_B | 0 | 23 | 342 | 2 | 316 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3f55_A | 0 | 23 | 342 | 2 | 316 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3em5_D | 0 | 23 | 342 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |