Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10038529 |
Family | CBM43 |
Protein Properties | Length: 218 Molecular Weight: 23846.1 Isoelectric Point: 7.4037 |
Chromosome | Chromosome/Scaffold: 28 Start: 1812287 End: 1813862 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 99 | 181 | 1.6e-33 |
WCVAAAGAPQIDLQKALDWACGLGMAECKEIQEEGACFHPNNLVSHASYAFNSYYQQNGNSDIACNFGGAASLTKHDPSYGKC |
Full Sequence |
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Protein Sequence Length: 218 Download |
MADSLKDRAA LKRTHKPDDR TPPVEQNHSK RIKMTTIRKK NKMINMLAYL QCTFFLAQSF 60 HLGDARAVEA AAERVEGAMP VTTYSPPEGN TTFLDGTTWC VAAAGAPQID LQKALDWACG 120 LGMAECKEIQ EEGACFHPNN LVSHASYAFN SYYQQNGNSD IACNFGGAAS LTKHDPSYGK 180 CIYASAGSVG WGAELRPEVG IWWKCAVIVM LLYWQTS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 8.0e-22 | 98 | 170 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-38 | 98 | 183 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ85566.1 | 0 | 37 | 214 | 1 | 176 | unknown [Medicago truncatula] |
GenBank | ACU17215.1 | 0 | 37 | 189 | 1 | 144 | unknown [Glycine max] |
EMBL | CBI30973.1 | 0 | 34 | 208 | 546 | 714 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274294.1 | 0 | 73 | 177 | 7 | 111 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002332014.1 | 0 | 73 | 177 | 7 | 111 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-16 | 98 | 186 | 12 | 99 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT019806 | 156 | 34 | 189 | 0 |
DT039619 | 156 | 34 | 189 | 0 |
DT019261 | 156 | 34 | 189 | 0 |
EX291939 | 129 | 78 | 202 | 0 |
FK001098 | 153 | 37 | 189 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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