| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10038646 |
| Family | GT64 |
| Protein Properties | Length: 827 Molecular Weight: 92828.5 Isoelectric Point: 9.1163 |
| Chromosome | Chromosome/Scaffold: 37 Start: 1076057 End: 1080032 |
| Description | glycosyltransferase family protein 47 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT64 | 580 | 815 | 0 |
| FTLLTMTYDARLWNLKMYVKHYSRCASVKEIVVVWNKGIPPTVSDLDSAVPVRIRVEKENSLNNRFRKDPLIKTRAVLELDDDIMMPCDDVERGFNVWRQ HPDRIVGFYPRLISGNPLKYRAEKYARSHKGYNMILTGAAFVDAETAFDRYWGDKAKTGREMVDKYFNCEDVLLNYLYANASSGKTVEYVRPAWAIDTSK FSGAAISKNTQVHYGIRSRCLTRFTQMYGSLSDRKW | |||
| Full Sequence |
|---|
| Protein Sequence Length: 827 Download |
| MGVVVVSGPA TSAGGGGVGN GGGSSTAAGG SCCDMGMKCW CKWRLGSHQL FPYRFLSVFS 60 SGFLFLLGCL VVYALIGVIY GWVAFNNKPY VQFNSFGCLE DGEGSWSLGV FYGDSPFSLK 120 PIESVNVWKN ESKAWPVANP VITCASVSDA GFPSNFVADP FLYVQWMITV LQLLILMRFH 180 SEAGLFCLLV LFSVSMAISS TANVYQEKRR GETLFIFYET KNPFTMQGDI GVAKSTDKGA 240 TWQQLGMALD EDWHLSYPYV FDYHGQIYMI PEGSLKGDLR LYRALEFPLQ WTLEKILIKK 300 PLVDSTIINY DGQYWLFGSD HSGFGTKKNG QLEIWHSNSP LGPWKPHKKN PIYNIDKKMG 360 ARNGGRPFLY NGNLYRFGQD CGETYGRRVR AFKVETLTKK DYKEVEVPLG FEESTKGRNA 420 WNGARYHHLD VQQLSSGEWI GVMDGDRVPS GDPSHRFVVG CASLASAAAV VIVLGLLLGA 480 VKCIIPLNWC AHYSGKRSDA LLVWERSNLF SSRVRRFCSR VNRVPTSIRG KIKYNTWAGR 540 LVLVVIFVIG AVLMCTGVKN VYGGNGAEEA YPVNGQYSQF TLLTMTYDAR LWNLKMYVKH 600 YSRCASVKEI VVVWNKGIPP TVSDLDSAVP VRIRVEKENS LNNRFRKDPL IKTRAVLELD 660 DDIMMPCDDV ERGFNVWRQH PDRIVGFYPR LISGNPLKYR AEKYARSHKG YNMILTGAAF 720 VDAETAFDRY WGDKAKTGRE MVDKYFNCED VLLNYLYANA SSGKTVEYVR PAWAIDTSKF 780 SGAAISKNTQ VHYGIRSRCL TRFTQMYGSL SDRKWEFDGR KDGWDL* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd08994 | GH43_like_2 | 0.008 | 311 | 391 | 83 | + Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. | ||
| pfam09258 | Glyco_transf_64 | 3.0e-67 | 580 | 818 | 248 | + Glycosyl transferase family 64 domain. Members of this family catalyze the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analog of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0031227 | intrinsic to endoplasmic reticulum membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB85556.1 | 0 | 46 | 826 | 21 | 764 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_196070.2 | 0 | 46 | 826 | 22 | 765 | glycosyltransferase family protein 47 [Arabidopsis thaliana] |
| RefSeq | XP_002262646.1 | 0 | 91 | 826 | 66 | 756 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002315348.1 | 0 | 31 | 826 | 21 | 847 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532924.1 | 0 | 93 | 826 | 16 | 704 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1on8_B | 1e-21 | 572 | 810 | 22 | 270 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1on8_A | 1e-21 | 572 | 810 | 22 | 270 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1on6_B | 1e-21 | 572 | 810 | 22 | 270 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1on6_A | 1e-21 | 572 | 810 | 22 | 270 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1omz_B | 1e-21 | 572 | 810 | 22 | 270 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
