y
Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10038801 |
Family | CBM43 |
Protein Properties | Length: 121 Molecular Weight: 13181.1 Isoelectric Point: 7.0826 |
Chromosome | Chromosome/Scaffold: 34 Start: 327321 End: 327936 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 40 | 119 | 1.4e-31 |
WCIADEQTPDDELQSALDWACGKAGGADCSKLQKNQPCFLPNTIRGHASFAFNSYYQRFKRKGATCYFNSAAMVTDLDPS |
Full Sequence |
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Protein Sequence Length: 121 Download |
MSLRSSSLIL VPRLLLLGVA LFPLISDGER LVGGFEAKEW CIADEQTPDD ELQSALDWAC 60 GKAGGADCSK LQKNQPCFLP NTIRGHASFA FNSYYQRFKR KGATCYFNSA AMVTDLDPSK 120 * 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-18 | 40 | 112 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-33 | 40 | 119 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92842.1 | 0 | 12 | 120 | 7 | 110 | unknown [Populus trichocarpa] |
EMBL | CBI28425.1 | 6.02558e-44 | 25 | 120 | 16 | 108 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002272918.1 | 2.00386e-43 | 30 | 119 | 20 | 108 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002307902.1 | 0 | 12 | 120 | 6 | 109 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522909.1 | 2.00386e-43 | 14 | 120 | 5 | 108 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.000000000000007 | 37 | 119 | 10 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |