| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10039032 |
| Family | GH5 |
| Protein Properties | Length: 449 Molecular Weight: 50499.3 Isoelectric Point: 6.198 |
| Chromosome | Chromosome/Scaffold: 34 Start: 1331900 End: 1333826 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 72 | 392 | 1.2e-30 |
| FYVNGWNSYWLLQESIWSSSRPRVSKVLKAGAELGLTVCRTWAFSDGDGPDALQIAPGVFNERVFKGLDYVIVEARRHGIRLILSLVNNLDAFGGKDQYV KWGQQAGINVSSSDDSFFANPAIRDYYKAYIKKIVTRKNSLSRVKYSDEPAIFAWELMNEPRCASRTCAPVLQAWISEMTSYLKSLDRRHLVTVGLEGFY GLKAANKSEVNPGEWAASLGSDFIENSAVRDIDFASVHSYPDSWMQNADLETKAKYLSRWVDSHISDGDSLLKKPVLFTEVGSVEKEGGNDRDVLLKIVY DKIYESAKKKEAGGGALIWQL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 449 Download |
| MDLRGWRERR LYPLVGGLIL LFLLYVSFFS DDLAFPSVVW QPKMGFVATD TIHFVIVDGD 60 GSRDLESTPP YFYVNGWNSY WLLQESIWSS SRPRVSKVLK AGAELGLTVC RTWAFSDGDG 120 PDALQIAPGV FNERVFKGLD YVIVEARRHG IRLILSLVNN LDAFGGKDQY VKWGQQAGIN 180 VSSSDDSFFA NPAIRDYYKA YIKKIVTRKN SLSRVKYSDE PAIFAWELMN EPRCASRTCA 240 PVLQAWISEM TSYLKSLDRR HLVTVGLEGF YGLKAANKSE VNPGEWAASL GSDFIENSAV 300 RDIDFASVHS YPDSWMQNAD LETKAKYLSR WVDSHISDGD SLLKKPVLFT EVGSVEKEGG 360 NDRDVLLKIV YDKIYESAKK KEAGGGALIW QLLVEGVEQY SDQFSFVPWH YPTTAKLIKE 420 QSCRLLHNVT GEAEGKPLNH DDVCFGHH* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 0.008 | 168 | 362 | 206 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 5.0e-20 | 98 | 392 | 295 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN77937.1 | 0 | 6 | 446 | 5 | 443 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI33116.1 | 0 | 6 | 446 | 5 | 441 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002272403.1 | 0 | 6 | 446 | 5 | 443 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002307872.1 | 0 | 44 | 436 | 1 | 392 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002520563.1 | 0 | 6 | 425 | 5 | 422 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 46 | 425 | 6 | 369 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 91 | 408 | 41 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 91 | 408 | 41 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 91 | 408 | 41 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 91 | 408 | 41 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
