Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10039059 |
Family | CBM43 |
Protein Properties | Length: 157 Molecular Weight: 17387.7 Isoelectric Point: 7.8108 |
Chromosome | Chromosome/Scaffold: 34 Start: 1439203 End: 1440993 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 67 | 151 | 2.2e-33 |
WCIADEQTPDDELQNALDWACGKVGGADCSKLQKKQPCFLPNTIRDHASFAFNSYYQRFKRQGATCYFNSAAMVTDLDPSQGSCK |
Full Sequence |
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Protein Sequence Length: 157 Download |
MEKRPSFRSK SVRNKCFWII SFISLPQSSC CMYSTNACGI VALLSSCSGP PRNGERLADG 60 GFEAKEWCIA DEQTPDDELQ NALDWACGKV GGADCSKLQK KQPCFLPNTI RDHASFAFNS 120 YYQRFKRQGA TCYFNSAAMV TDLDPSQGSC KYDYLP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 8.0e-17 | 67 | 139 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-35 | 67 | 152 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92842.1 | 0 | 58 | 156 | 24 | 119 | unknown [Populus trichocarpa] |
RefSeq | XP_002272811.1 | 0 | 65 | 156 | 28 | 118 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002272918.1 | 0 | 65 | 156 | 28 | 118 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002307902.1 | 0 | 58 | 156 | 23 | 118 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522909.1 | 0 | 59 | 156 | 23 | 117 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-16 | 64 | 152 | 10 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT500003 | 100 | 58 | 157 | 0 |
CV272267 | 100 | 58 | 157 | 0 |
CV246773 | 100 | 58 | 157 | 0 |
EC945425 | 92 | 65 | 156 | 0 |
FY898856 | 102 | 56 | 157 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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