Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10039095 |
Family | CBM43 |
Protein Properties | Length: 490 Molecular Weight: 53082.6 Isoelectric Point: 7.0384 |
Chromosome | Chromosome/Scaffold: 34 Start: 1590864 End: 1592939 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 369 | 448 | 4.7e-26 |
WCVADSSKDLTNVANHMRIACSEADCTTLNYGGSCNEIGAKGNISYAFNSYYQLNMQNEKSCDFDGLGMVTFLDPSVGEC | |||
GH17 | 29 | 348 | 0 |
IGVNWGTLSFHRLKPSTVVDLLKENKIGKVKLFDADSGSLQALMGSGIQVMVGIPNEMLSTISSSTAAADLWVRQNVSRYVVKGGADIRYIAVGNEPFLT SYSGQFQSYVMPALLNLQQSLTKANLAGYVKLVVPCNADAYEAASLPSQGAFRPELTQIITQLVSFLNSNGAPFVVNIYPFLSLYGNSDFPQDYAFFEGT THAVTDGPNVYTNAFDGNLDTLVSALSKLGYGQMPIVIGEVGWPSDGAPGANLTAAKVFNQGLINHVVGNKGTPLRPGVPPMDVYIFSLLDEGAKSVLPG NFERHWGIFSFDGQAKYALN |
Full Sequence |
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Protein Sequence Length: 490 Download |
MSGLRATAKS LLLFLTVLCW WCRVGESAIG VNWGTLSFHR LKPSTVVDLL KENKIGKVKL 60 FDADSGSLQA LMGSGIQVMV GIPNEMLSTI SSSTAAADLW VRQNVSRYVV KGGADIRYIA 120 VGNEPFLTSY SGQFQSYVMP ALLNLQQSLT KANLAGYVKL VVPCNADAYE AASLPSQGAF 180 RPELTQIITQ LVSFLNSNGA PFVVNIYPFL SLYGNSDFPQ DYAFFEGTTH AVTDGPNVYT 240 NAFDGNLDTL VSALSKLGYG QMPIVIGEVG WPSDGAPGAN LTAAKVFNQG LINHVVGNKG 300 TPLRPGVPPM DVYIFSLLDE GAKSVLPGNF ERHWGIFSFD GQAKYALNLG QGNKLLKNAK 360 NVQYLPSRWC VADSSKDLTN VANHMRIACS EADCTTLNYG GSCNEIGAKG NISYAFNSYY 420 QLNMQNEKSC DFDGLGMVTF LDPSVGECRF LVGVTESNHS SSSCSGLSPR FRVMIWLFFI 480 WATARFFPM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0006 | 203 | 340 | 153 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 5.0e-17 | 368 | 437 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-29 | 369 | 450 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-79 | 29 | 345 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08871.1 | 0 | 26 | 464 | 4 | 445 | Glycoside hydrolase, family 17; X8 [Medicago truncatula] |
EMBL | CAB10499.1 | 0 | 26 | 463 | 49 | 480 | glucanase like protein [Arabidopsis thaliana] |
RefSeq | NP_193451.2 | 0 | 26 | 463 | 22 | 453 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002329964.1 | 0 | 1 | 462 | 1 | 459 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525026.1 | 0 | 1 | 460 | 1 | 456 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 29 | 349 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghr_A | 0 | 29 | 349 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aq0_B | 0 | 29 | 349 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 29 | 349 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3f55_D | 0 | 29 | 349 | 2 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |