Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10039145 |
Family | GT47 |
Protein Properties | Length: 511 Molecular Weight: 57910.6 Isoelectric Point: 9.211 |
Chromosome | Chromosome/Scaffold: 34 Start: 1858613 End: 1861215 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 116 | 426 | 0 |
LRVYVYRMPLKFTYDLLRLFDSTYQDTNNLTSNGSPVHRLIEQHSVDYWLWADLIAPQSERLLKSVIRVDRQEDADLFYIPFFTTISFFLLDKQECKPLY REALKWVTDQPAWKRSQGRDHILPVHHPWSFKSVRRYMKNAIWLLPDMDSTGNWYKPGQVYLEKDLILPYVANLDLCDATCLAEYESKRTTLLFFRGRLK RNAGGKIRAKLVSQLSGAEGVVIQEGTAGERGKELAQNGMRKSIFCLNPAGDTPSSARLFDAIVSGCIPVIISDELELPFEGILDYRKIALFVSSSDASE PGWLIQFLRSI |
Full Sequence |
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Protein Sequence Length: 511 Download |
MATKFSSRSR SPIFLFSIFI AVAVSLLILT FIFSSSPPTL HSSPAGLLSS SVSIRPETSF 60 VTSLRNFLIS RPSDGDALIS ESHLPPSSTV LDDAVFDRQT DRMYRGDSIY PLDFPLRVYV 120 YRMPLKFTYD LLRLFDSTYQ DTNNLTSNGS PVHRLIEQHS VDYWLWADLI APQSERLLKS 180 VIRVDRQEDA DLFYIPFFTT ISFFLLDKQE CKPLYREALK WVTDQPAWKR SQGRDHILPV 240 HHPWSFKSVR RYMKNAIWLL PDMDSTGNWY KPGQVYLEKD LILPYVANLD LCDATCLAEY 300 ESKRTTLLFF RGRLKRNAGG KIRAKLVSQL SGAEGVVIQE GTAGERGKEL AQNGMRKSIF 360 CLNPAGDTPS SARLFDAIVS GCIPVIISDE LELPFEGILD YRKIALFVSS SDASEPGWLI 420 QFLRSISRAQ IKEMQANLAK YSRHFVYSSP AQPFGPEDLV WRMMSGKMVN IKLHIRRSQR 480 VVRESRSICT CDCRRPAGNV TLPGQITTSL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 4.0e-69 | 115 | 426 | 320 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY76230.1 | 0 | 42 | 490 | 45 | 488 | hypothetical protein OsI_04166 [Oryza sativa Indica Group] |
RefSeq | NP_197191.1 | 0 | 8 | 495 | 16 | 497 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002285599.1 | 0 | 53 | 503 | 59 | 513 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002325382.1 | 0 | 42 | 495 | 43 | 497 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520033.1 | 0 | 49 | 503 | 49 | 504 | catalytic, putative [Ricinus communis] |