Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10039179 |
Family | CBM43 |
Protein Properties | Length: 518 Molecular Weight: 55323.6 Isoelectric Point: 4.8474 |
Chromosome | Chromosome/Scaffold: 34 Start: 1987500 End: 1989474 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 383 | 464 | 2e-31 |
CVAKSNADPNKLKAGLDWACGQGGANCAPVQKGRPCFQPDSYQNHASFAFNDYYQKMHGAGATCDFDGTASITKVDPSYGSC | |||
GH17 | 46 | 365 | 0 |
VGINIGTDVSNMPPASDIVTMLKAKDITHVRLYDADSHMLRALANSSIEVMVGVTNEEVLMIGESPAAAASWINKNVAAYLPSTNITAIAVGSEVLTSVP NLSPVLVPSMQYLHKALVASNLNYQIKVSTPQAMDVIPKPFPPSTATFTNDNNTIYQLLQFLKNTNSYFMLNAYPYYGYTTGNGIFPLDYALFQPLASVK QIVDPNTLLHYDSMFDAMVDAAYYAMDALNFSGIPVVVTETGWPTLGGAKEPDATVENAGKYISSLIQRVHNDSGPPSHPSIPINTYIYELFNEDKRPGP ESEKNWGLYSPNGTAVYALN |
Full Sequence |
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Protein Sequence Length: 518 Download |
MHMVTALTFL LDNSCAHIEG LCQKIESEAI SETLLKYSIT FIGAFVGINI GTDVSNMPPA 60 SDIVTMLKAK DITHVRLYDA DSHMLRALAN SSIEVMVGVT NEEVLMIGES PAAAASWINK 120 NVAAYLPSTN ITAIAVGSEV LTSVPNLSPV LVPSMQYLHK ALVASNLNYQ IKVSTPQAMD 180 VIPKPFPPST ATFTNDNNTI YQLLQFLKNT NSYFMLNAYP YYGYTTGNGI FPLDYALFQP 240 LASVKQIVDP NTLLHYDSMF DAMVDAAYYA MDALNFSGIP VVVTETGWPT LGGAKEPDAT 300 VENAGKYISS LIQRVHNDSG PPSHPSIPIN TYIYELFNED KRPGPESEKN WGLYSPNGTA 360 VYALNLNGSD DVMSGNSTGG TFCVAKSNAD PNKLKAGLDW ACGQGGANCA PVQKGRPCFQ 420 PDSYQNHASF AFNDYYQKMH GAGATCDFDG TASITKVDPS YGSCIFTGSS NSSGGGDMFS 480 PTAFGPVSPQ FGTSFKLVAS RSRVAAAAAV LGLVFLV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-5 | 277 | 357 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 9.0e-19 | 381 | 453 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-37 | 381 | 466 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-80 | 46 | 365 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB01763.1 | 0 | 57 | 494 | 1 | 438 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
EMBL | CAN72077.1 | 0 | 47 | 469 | 27 | 448 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_187965.1 | 0 | 43 | 494 | 23 | 474 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002283548.1 | 0 | 47 | 488 | 27 | 467 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002297638.1 | 0 | 57 | 516 | 1 | 461 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 46 | 366 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 46 | 366 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 46 | 366 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 46 | 366 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 46 | 366 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG174179 | 224 | 295 | 518 | 0 |
DV161369 | 274 | 43 | 315 | 0 |
JG221796 | 224 | 295 | 518 | 0 |
JG221680 | 224 | 295 | 518 | 0 |
BG648951 | 263 | 77 | 338 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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