| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10039519 |
| Family | GH2 |
| Protein Properties | Length: 428 Molecular Weight: 47102.2 Isoelectric Point: 5.8408 |
| Chromosome | Chromosome/Scaffold: 15 Start: 188137 End: 189808 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 3 | 292 | 0 |
| DGKLKIINTNFFDTTQVLGFTWAAHGDGIELGSGELSLPVIEPQKSYEMQWESGPWYSLWASSNAGEVFMTVTAKLLQSTHWLEAGHIISSTQLQLPGRK EILPHALKSKDAPISTEVVGDVIRISHQSLWEITFDKLTGAVASWKVKGVSVLNKGIFPCFWRAPTDNDKGGEDCSYYSKWKAAHLDSIVFQTKSCSIQN SANDHVKIEVVYSGVLSGGDSSTVLFEVEMTHIVYGSGDLIVECKATPSPNLPPLPRVGVEFHLEKTMDQVSWYGRGPFECYPDRKAAAN | |||
| Full Sequence |
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| Protein Sequence Length: 428 Download |
| MKDGKLKIIN TNFFDTTQVL GFTWAAHGDG IELGSGELSL PVIEPQKSYE MQWESGPWYS 60 LWASSNAGEV FMTVTAKLLQ STHWLEAGHI ISSTQLQLPG RKEILPHALK SKDAPISTEV 120 VGDVIRISHQ SLWEITFDKL TGAVASWKVK GVSVLNKGIF PCFWRAPTDN DKGGEDCSYY 180 SKWKAAHLDS IVFQTKSCSI QNSANDHVKI EVVYSGVLSG GDSSTVLFEV EMTHIVYGSG 240 DLIVECKATP SPNLPPLPRV GVEFHLEKTM DQVSWYGRGP FECYPDRKAA ANVGVYEQTV 300 ADMHVPYIVP GECGGRADVR WVTFQDKDGV GIFASSYGSS PPLQVSASYY STAELDRATH 360 NERLIRGNDI EVHLDHKHMG LGGDDSWSPC VHEKFLVPAM PYTFSLRMCP VTAQTSGLDT 420 YKSQVQN* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK09525 | lacZ | 2.0e-61 | 29 | 410 | 389 | + beta-D-galactosidase; Reviewed | ||
| PRK10340 | ebgA | 1.0e-63 | 4 | 414 | 412 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| pfam02929 | Bgal_small_N | 3.0e-85 | 134 | 409 | 276 | + Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. | ||
| smart01038 | Bgal_small_N | 2.0e-107 | 133 | 408 | 277 | + Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002266400.1 | 0 | 1 | 427 | 681 | 1114 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002266434.1 | 0 | 1 | 427 | 681 | 1115 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002299206.1 | 0 | 1 | 427 | 680 | 1110 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303929.1 | 0 | 1 | 427 | 680 | 1113 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 1 | 427 | 680 | 1110 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t2q_D | 2e-32 | 24 | 409 | 683 | 1050 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 3t2q_C | 2e-32 | 24 | 409 | 683 | 1050 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 3t2q_B | 2e-32 | 24 | 409 | 683 | 1050 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 3t2q_A | 2e-32 | 24 | 409 | 683 | 1050 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 3t2p_D | 2e-32 | 24 | 409 | 683 | 1050 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CX077400 | 289 | 126 | 406 | 0 |
| EX276078 | 330 | 73 | 391 | 0 |
| DV999274 | 287 | 129 | 408 | 0 |
| DW517824 | 300 | 83 | 375 | 0 |
| JG608181 | 269 | 147 | 408 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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