| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10039702 |
| Family | GH14 |
| Protein Properties | Length: 512 Molecular Weight: 58193.1 Isoelectric Point: 4.9289 |
| Chromosome | Chromosome/Scaffold: 15 Start: 1230102 End: 1232612 |
| Description | beta-amylase 5 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 18 | 458 | 0 |
| FVMLPLGVVTRDNVFENKEEVEKQLKKLKSAGIDGVMIDVWWGIIEAKGPKQYDWSGYRELFELLKELDLKIQAIMSFHKCGGNVGDNVVIPLPDWVLKV GEDDQDVFYTDRAGVRNEEYLSLGVDHLPLFGKRASVGNMEYESPDVDQLPFCGRSPVQIYGDFMKSFRENMADFFDSGLIIDIEVGLGPAGELRYPSYP ALQGWVFPGIGEFQCYDKYMAADFKKAAMEAGHPEWELPDDAGEYNNTPDQTGFFKSNGSYLSEKGKFFLTWYSHKLLVHGDNILDEANKAFLGCKVKLA IKVSGIFWWYMHPSHAAELVAGYYNLNDRDGYRPVARMVSRHHGLVNFTCLEIRNTEWPAESKSAPQQLVQQVLSASWREGIDVAGENALPRYDVDAYNQ ILLNARPNGVSKNGEKKLRMYGVTILRLTDGLLEQKNFEVF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 512 Download |
| MQAPTYDEKM LLNYVPTFVM LPLGVVTRDN VFENKEEVEK QLKKLKSAGI DGVMIDVWWG 60 IIEAKGPKQY DWSGYRELFE LLKELDLKIQ AIMSFHKCGG NVGDNVVIPL PDWVLKVGED 120 DQDVFYTDRA GVRNEEYLSL GVDHLPLFGK RASVGNMEYE SPDVDQLPFC GRSPVQIYGD 180 FMKSFRENMA DFFDSGLIID IEVGLGPAGE LRYPSYPALQ GWVFPGIGEF QCYDKYMAAD 240 FKKAAMEAGH PEWELPDDAG EYNNTPDQTG FFKSNGSYLS EKGKFFLTWY SHKLLVHGDN 300 ILDEANKAFL GCKVKLAIKV SGIFWWYMHP SHAAELVAGY YNLNDRDGYR PVARMVSRHH 360 GLVNFTCLEI RNTEWPAESK SAPQQLVQQV LSASWREGID VAGENALPRY DVDAYNQILL 420 NARPNGVSKN GEKKLRMYGV TILRLTDGLL EQKNFEVFKK FVRRMHANQD YCGDASKYGH 480 EIGKLERSVK EVTKPIEPYP WDEETDMPVE P* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02705 | PLN02705 | 5.0e-121 | 14 | 424 | 414 | + beta-amylase | ||
| PLN02905 | PLN02905 | 1.0e-139 | 14 | 466 | 457 | + beta-amylase | ||
| PLN00197 | PLN00197 | 2.0e-146 | 15 | 470 | 460 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 2.0e-157 | 15 | 465 | 454 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 1 | 511 | 520 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1UKP | 0 | 5 | 510 | 2 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| GenBank | AAZ38831.1 | 0 | 5 | 510 | 3 | 495 | beta-amylase [Glycine max] |
| DDBJ | BAA09462.1 | 0 | 5 | 510 | 3 | 495 | beta-amylase [Glycine max] |
| RefSeq | XP_002327920.1 | 0 | 6 | 510 | 7 | 498 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515712.1 | 0 | 3 | 510 | 4 | 498 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ukp_D | 0 | 5 | 510 | 2 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_C | 0 | 5 | 510 | 2 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_B | 0 | 5 | 510 | 2 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_A | 0 | 5 | 510 | 2 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_D | 0 | 5 | 510 | 2 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777976 | 514 | 6 | 510 | 0 |
| HO803971 | 417 | 93 | 501 | 0 |
| HO782669 | 406 | 110 | 507 | 0 |
| GT625519 | 305 | 92 | 396 | 0 |
| CV290805 | 330 | 136 | 465 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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