| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10039833 |
| Family | GH5 |
| Protein Properties | Length: 433 Molecular Weight: 49524.4 Isoelectric Point: 7.9005 |
| Chromosome | Chromosome/Scaffold: 15 Start: 1823204 End: 1825817 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 52 | 382 | 4.1e-35 |
| DGRPFYVNGWNSYWLMEHSADDQRRHKTSRMLQAGSKMGLTVCRTWAFNDGGRDALQVSPGQFEERVFKALDHVIAEARAHKVRLILSLVNNLKAYGGKD RYVRWAWEEGIGLSASNDSFFYDPSIKKYFKHYLQTVLTRKNTVTGVEYRNDPTIFAWELMNEPRCMTDPSGDTLQDWTEEMSAFVKSIDNNHLLTVGLE GFYGPKNPKRLTVNPANWAEELGSDFIRNSKVVHLDFASVHIYPDHWVAHQSFEDKLTFVSKWMRSHIEDGHKELNKPVLFTEFGLSNMNKDFQPSQRDW LYKTVYDIIYKSAKRKHAGAGALMWQLFVDD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 433 Download |
| MGGTAPCIPI LGVASCVIFI YLSFGATWPI GFLPKAPAWS FVQRNGTGFV LDGRPFYVNG 60 WNSYWLMEHS ADDQRRHKTS RMLQAGSKMG LTVCRTWAFN DGGRDALQVS PGQFEERVFK 120 ALDHVIAEAR AHKVRLILSL VNNLKAYGGK DRYVRWAWEE GIGLSASNDS FFYDPSIKKY 180 FKHYLQTVLT RKNTVTGVEY RNDPTIFAWE LMNEPRCMTD PSGDTLQDWT EEMSAFVKSI 240 DNNHLLTVGL EGFYGPKNPK RLTVNPANWA EELGSDFIRN SKVVHLDFAS VHIYPDHWVA 300 HQSFEDKLTF VSKWMRSHIE DGHKELNKPV LFTEFGLSNM NKDFQPSQRD WLYKTVYDII 360 YKSAKRKHAG AGALMWQLFV DDMEDSNDDF GIVPWERAST YKLITEQSCK LAKLRGAIDE 420 NRNMKELCLP KQ* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12876 | Cellulase-like | 0.0008 | 199 | 294 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| pfam00150 | Cellulase | 3.0e-10 | 168 | 352 | 187 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG3934 | COG3934 | 6.0e-29 | 81 | 389 | 310 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95966.1 | 0 | 1 | 432 | 5 | 435 | unknown [Populus trichocarpa] |
| GenBank | ACN78665.1 | 0 | 1 | 432 | 14 | 443 | endo-beta-mannanase [Malus x domestica] |
| RefSeq | NP_179660.2 | 0 | 3 | 428 | 6 | 429 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002330687.1 | 0 | 1 | 432 | 5 | 435 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517909.1 | 0 | 9 | 432 | 10 | 431 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 40 | 414 | 5 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 50 | 415 | 21 | 377 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 50 | 415 | 21 | 377 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 50 | 415 | 21 | 377 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 50 | 415 | 21 | 377 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
