Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10039923 |
Family | CBM43 |
Protein Properties | Length: 161 Molecular Weight: 16984.9 Isoelectric Point: 4.1272 |
Chromosome | Chromosome/Scaffold: 12 Start: 196790 End: 198723 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 80 | 159 | 2.6e-30 |
WCVPKQGVADAQLQANLDYVCGLPDMDCSPIQPGGPCYEPNTVASHAAFAMNLFFQNHGTNHDCEFSDTAIVTNMDPSRS |
Full Sequence |
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Protein Sequence Length: 161 Download |
MAKVGEMGLF GRSSLSVSSY SEAEYGADML AAVQEGVVHG VVDFSGLLEG DGRVEGLVDG 60 IGLAEHVRLE IEDAQGKRSW CVPKQGVADA QLQANLDYVC GLPDMDCSPI QPGGPCYEPN 120 TVASHAAFAM NLFFQNHGTN HDCEFSDTAI VTNMDPSRST * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-18 | 79 | 150 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-33 | 79 | 160 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN61862.1 | 7e-28 | 80 | 157 | 393 | 470 | hypothetical protein [Vitis vinifera] |
EMBL | CBI32582.1 | 2e-27 | 80 | 157 | 404 | 481 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002282736.1 | 3e-27 | 79 | 157 | 376 | 454 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002284340.1 | 2e-27 | 80 | 157 | 404 | 481 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002510373.1 | 3e-28 | 77 | 160 | 370 | 453 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 9e-27 | 79 | 157 | 12 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FS061372 | 83 | 76 | 157 | 2e-30 |
GW927956 | 79 | 80 | 157 | 5e-30 |
HS557505 | 82 | 77 | 157 | 1e-29 |
HS557504 | 82 | 77 | 157 | 1e-29 |
BJ576482 | 98 | 62 | 157 | 1e-29 |
Sequence Alignments (This image is cropped. Click for full image.) |
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