| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10040134 |
| Family | GH14 |
| Protein Properties | Length: 548 Molecular Weight: 61039.1 Isoelectric Point: 8.7707 |
| Chromosome | Chromosome/Scaffold: 86 Start: 359660 End: 362142 |
| Description | chloroplast beta-amylase |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 92 | 499 | 0 |
| FVMLPLDTVTHGGNLNKPRAMNASLLALKRAGVEGVMVDAWWGLVEKDGPLRYNWEGYAELVEMVKHHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEE ISKNPDLVYTDRSGRRNPEYISLGCDSLAVLRGRTPIQVYSDYMRSFRDRFTDYLGHVIVEIQVGMGPCGELRYPAYPTGSAVLLTKIFFVFIQYMRASL KASAEEQEKKEWGQGGPHDSGQYNQYPEDTGFFKRDGTWKTEYGHFFLQWYSSKLLQHGNTILSSAKSIFKGTGAKLSGKVAGIHWHYRTRSHAAELTAG YYNTRHHDGYLPLAQMFSKHGAVLNFTCMEMRDGEQPENGSCSPEGLVKQVKMATKASGTELAGENALERYDQAAYRQVVSTSGGGLAAFTYLRLNKRLF EEGNWRNL | |||
| Full Sequence |
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| Protein Sequence Length: 548 Download |
| MALTLRSSTS FINLNDYSSL NNNNNIIISS ISFKPARLCS IQAMSSSHVL LEQQPHRSVE 60 RLHDQTLSGS HHHHISSSTS SNGSSSSKVP VFVMLPLDTV THGGNLNKPR AMNASLLALK 120 RAGVEGVMVD AWWGLVEKDG PLRYNWEGYA ELVEMVKHHG LKLQVVMSFH QCGGNVGDSC 180 SIPLPPWVLE EISKNPDLVY TDRSGRRNPE YISLGCDSLA VLRGRTPIQV YSDYMRSFRD 240 RFTDYLGHVI VEIQVGMGPC GELRYPAYPT GSAVLLTKIF FVFIQYMRAS LKASAEEQEK 300 KEWGQGGPHD SGQYNQYPED TGFFKRDGTW KTEYGHFFLQ WYSSKLLQHG NTILSSAKSI 360 FKGTGAKLSG KVAGIHWHYR TRSHAAELTA GYYNTRHHDG YLPLAQMFSK HGAVLNFTCM 420 EMRDGEQPEN GSCSPEGLVK QVKMATKASG TELAGENALE RYDQAAYRQV VSTSGGGLAA 480 FTYLRLNKRL FEEGNWRNLV EFVKNMSESG RNHKGLLPEC DTARSDLYVG FVKGKSVRKD 540 SKEILLV* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 3.0e-127 | 89 | 506 | 431 | + beta-amylase | ||
| pfam01373 | Glyco_hydro_14 | 1.0e-154 | 92 | 502 | 425 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
| PLN02801 | PLN02801 | 6.0e-168 | 89 | 506 | 432 | + beta-amylase | ||
| PLN02803 | PLN02803 | 0 | 1 | 547 | 564 | + beta-amylase | ||
| PLN00197 | PLN00197 | 0 | 89 | 514 | 439 | + beta-amylase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN62440.1 | 0 | 1 | 547 | 1 | 543 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002282871.1 | 0 | 1 | 547 | 1 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326690.1 | 0 | 1 | 545 | 1 | 546 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329547.1 | 0 | 1 | 545 | 1 | 547 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517513.1 | 0 | 1 | 547 | 1 | 547 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1byd_A | 0 | 78 | 506 | 1 | 441 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 1byc_A | 0 | 78 | 506 | 1 | 441 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 1byb_A | 0 | 78 | 506 | 1 | 441 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 1bya_A | 0 | 78 | 506 | 1 | 441 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
| PDB | 1wdp_A | 0 | 78 | 506 | 1 | 441 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| BU103692 | 455 | 89 | 539 | 0 |
| HO794833 | 414 | 127 | 533 | 0 |
| HO781538 | 349 | 88 | 433 | 0 |
| HO825836 | 388 | 163 | 543 | 0 |
| HO593646 | 412 | 109 | 508 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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