| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10040226 |
| Family | AA1 |
| Protein Properties | Length: 324 Molecular Weight: 34508.3 Isoelectric Point: 6.1079 |
| Chromosome | Chromosome/Scaffold: 86 Start: 858541 End: 860288 |
| Description | Laccase/Diphenol oxidase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 55 | 296 | 0 |
| YSLHVESGKKSLLGIVNAALNDELFLKIAGHKFTVVEADATYTKPFTTDTIFLGPGQTTNALLTADQTAGKYIIAVSPFMDTVVAVDNVTAVGFLRYKGI PPFSPPQLTATPAINSTAVTSSFAAGLRSLNSKEFPAAVPQTVDHSLFFAIGVGINACPSCFNGIRAVADINNVSFVPPAVALLQAHYFGMQVVFTDDLP ANPLSQFNYTGVSTPGSLQTENGVRVYGLAFNSTVQVVLQGT | |||
| Full Sequence |
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| Protein Sequence Length: 324 Download |
| MESPSSNRSI LIALVLLWPA LVDCATRKYT FNASYFETIG TVYVIYPGDF TRTGYSLHVE 60 SGKKSLLGIV NAALNDELFL KIAGHKFTVV EADATYTKPF TTDTIFLGPG QTTNALLTAD 120 QTAGKYIIAV SPFMDTVVAV DNVTAVGFLR YKGIPPFSPP QLTATPAINS TAVTSSFAAG 180 LRSLNSKEFP AAVPQTVDHS LFFAIGVGIN ACPSCFNGIR AVADINNVSF VPPAVALLQA 240 HYFGMQVVFT DDLPANPLSQ FNYTGVSTPG SLQTENGVRV YGLAFNSTVQ VVLQGTSVFS 300 PGEPSGSSSW IQFLRGRDRV GEF* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02604 | PLN02604 | 2.0e-13 | 55 | 294 | 241 | + oxidoreductase | ||
| PLN02191 | PLN02191 | 5.0e-15 | 57 | 299 | 248 | + L-ascorbate oxidase | ||
| TIGR03388 | ascorbase | 2.0e-21 | 55 | 294 | 250 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| pfam00394 | Cu-oxidase | 2.0e-27 | 54 | 153 | 100 | + Multicopper oxidase. Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. | ||
| TIGR03389 | laccase | 1.0e-104 | 51 | 302 | 256 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA74102.1 | 0 | 54 | 301 | 88 | 335 | laccase [Populus trichocarpa] |
| EMBL | CAA74103.1 | 0 | 4 | 301 | 152 | 453 | laccase [Populus trichocarpa] |
| RefSeq | XP_002311202.1 | 0 | 54 | 301 | 207 | 454 | laccase [Populus trichocarpa] |
| RefSeq | XP_002316233.1 | 0 | 4 | 301 | 152 | 453 | laccase 3 [Populus trichocarpa] |
| RefSeq | XP_002530417.1 | 0 | 4 | 301 | 152 | 452 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gyc_A | 0.000000000004 | 57 | 304 | 188 | 394 | A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions |
| PDB | 2hrh_A | 0.000000005 | 59 | 246 | 189 | 359 | A Chain A, Crystal Structure Determination At Room Temperature Of A Laccase From Trametes Versicolor In Its Oxidised Form Containing A Full Complement Of Copper Ions |
| PDB | 2hrg_A | 0.000000005 | 59 | 246 | 189 | 359 | A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii Complexed With P-Methylbenzoate |
| PDB | 2qt6_B | 0.00000004 | 57 | 304 | 188 | 393 | A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus |
| PDB | 2qt6_A | 0.00000004 | 57 | 304 | 188 | 393 | A Chain A, Crystal Structure Determination Of A Blue Laccase From Lentinus Tigrinus |
| Signal Peptide | ||||
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| Cleavage Site | ||||
| 24 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JG190565 | 200 | 32 | 231 | 0 |
| DT472855 | 247 | 55 | 301 | 0 |
| JG229583 | 177 | 125 | 301 | 0 |
| FC887729 | 250 | 54 | 301 | 0 |
| JG229583 | 22 | 302 | 323 | 0.022 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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