| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10040232 |
| Family | GH17 |
| Protein Properties | Length: 397 Molecular Weight: 43390 Isoelectric Point: 6.743 |
| Chromosome | Chromosome/Scaffold: 86 Start: 879352 End: 880542 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH17 | 62 | 368 | 0 |
| NQEHPEAIASTVTDLNFGAVRLPHPDPNLIRAFGFTDITVLLSIPNVLIPSLASNRTLAQRWIYVHVLPFFPRTKIAIISVGVDALPELNLLLSAIQNVH LALRDLGINKISVSTTFSFVNLVTTAFPPSSATFKETIGGILMRPLLQFLEDTNSSLLVNLYPYNVYRMHSQIPLGFALFQEHNFNFRDDVVTGVRYRNL FDMMVDAVVTSMAVAGHENVPVIIAETGWPSSGGEGPFEADANPAYAELYLRSLVAHLVSGRGTPLRKEGVSQVYIYELVDREVHEQGTRNWGVLYPNTS KKYHFDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 397 Download |
| MDALRLSFYT VPLLLLCLSF IHPLSLTAPP SASVIGVTYT PPITSSSSTG AGNASQPPPP 60 QNQEHPEAIA STVTDLNFGA VRLPHPDPNL IRAFGFTDIT VLLSIPNVLI PSLASNRTLA 120 QRWIYVHVLP FFPRTKIAII SVGVDALPEL NLLLSAIQNV HLALRDLGIN KISVSTTFSF 180 VNLVTTAFPP SSATFKETIG GILMRPLLQF LEDTNSSLLV NLYPYNVYRM HSQIPLGFAL 240 FQEHNFNFRD DVVTGVRYRN LFDMMVDAVV TSMAVAGHEN VPVIIAETGW PSSGGEGPFE 300 ADANPAYAEL YLRSLVAHLV SGRGTPLRKE GVSQVYIYEL VDREVHEQGT RNWGVLYPNT 360 SKKYHFDFSS GTTSITISKG KLFLLVIASF FLLCSL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.003 | 280 | 359 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-64 | 77 | 368 | 299 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN71832.1 | 0 | 42 | 322 | 23 | 307 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_191137.1 | 0 | 35 | 392 | 31 | 371 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002276218.1 | 0 | 42 | 396 | 23 | 380 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002316237.1 | 0 | 67 | 393 | 62 | 392 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530412.1 | 0 | 22 | 390 | 26 | 381 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 3e-40 | 66 | 368 | 15 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghr_A | 8.99999e-40 | 70 | 368 | 15 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1aq0_B | 8.99999e-40 | 70 | 368 | 15 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 8.99999e-40 | 70 | 368 | 15 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 3ur8_B | 5e-34 | 77 | 369 | 28 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
