Basic Information | |
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Species | Linum usitatissimum |
Cazyme ID | Lus10040294 |
Family | CBM43 |
Protein Properties | Length: 448 Molecular Weight: 48773 Isoelectric Point: 9.3084 |
Chromosome | Chromosome/Scaffold: 86 Start: 1213855 End: 1215435 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 362 | 444 | 4e-29 |
WCIPKASASDQALQGNINYVCSQKGMDCKPIQAGGACFAPGNVRSHASFVMNSFYRYHGGRPFNCDFAGSGVVTFSDPSKGLC | |||
GH17 | 27 | 340 | 0 |
IGVNYGTIADNLPPPSQVANFITTQTIIDSVKIFDANPDILRAFANTNVKVTVTVGNGDIPALTDAQAARQWVAANIKPYYPATKIHRISVGNEILATGN KLWISRLVPCMWALHNALVQAGIRDIQVSTPHTLGIISNSVQPSQARIRRGYDKVIFEPMLKFLRETKSPLMVNPYPYFSYAPSIADYALFRPNRGVHDS YTNITYYNMFEAMMDAVYSAIKAMGYADVDIVVAETGWPSAGDPNQPACTVDNAISFNANLIKAVTSGRGTPLMPNRKFETYIFAMFNENLKPGQSNERN WGLFRPDLTAVYNV |
Full Sequence |
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Protein Sequence Length: 448 Download |
MTANILLLLS AAAAIIVISL FTTAAAIGVN YGTIADNLPP PSQVANFITT QTIIDSVKIF 60 DANPDILRAF ANTNVKVTVT VGNGDIPALT DAQAARQWVA ANIKPYYPAT KIHRISVGNE 120 ILATGNKLWI SRLVPCMWAL HNALVQAGIR DIQVSTPHTL GIISNSVQPS QARIRRGYDK 180 VIFEPMLKFL RETKSPLMVN PYPYFSYAPS IADYALFRPN RGVHDSYTNI TYYNMFEAMM 240 DAVYSAIKAM GYADVDIVVA ETGWPSAGDP NQPACTVDNA ISFNANLIKA VTSGRGTPLM 300 PNRKFETYIF AMFNENLKPG QSNERNWGLF RPDLTAVYNV GILKNNRPQP SPAPIIVGKK 360 SWCIPKASAS DQALQGNINY VCSQKGMDCK PIQAGGACFA PGNVRSHASF VMNSFYRYHG 420 GRPFNCDFAG SGVVTFSDPS KGLCRYM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0006 | 91 | 333 | 247 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-19 | 361 | 433 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-33 | 361 | 446 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-86 | 27 | 340 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95730.1 | 0 | 14 | 446 | 12 | 447 | unknown [Populus trichocarpa] |
RefSeq | XP_002283647.1 | 0 | 5 | 447 | 3 | 446 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002312097.1 | 0 | 14 | 446 | 12 | 447 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530862.1 | 0 | 22 | 443 | 23 | 442 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002530863.1 | 0 | 4 | 447 | 9 | 457 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 27 | 340 | 3 | 312 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
PDB | 3ur8_A | 0 | 27 | 340 | 3 | 312 | A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide |
PDB | 3ur7_B | 0 | 27 | 340 | 3 | 312 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 27 | 340 | 3 | 312 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3f55_D | 0 | 27 | 340 | 2 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |