| Basic Information | |
|---|---|
| Species | Linum usitatissimum |
| Cazyme ID | Lus10040446 |
| Family | CE8 |
| Protein Properties | Length: 290 Molecular Weight: 32314.6 Isoelectric Point: 7.4641 |
| Chromosome | Chromosome/Scaffold: 86 Start: 1949112 End: 1950890 |
| Description | pectinesterase 11 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 88 | 213 | 4.4e-34 |
| FESATLSVLAPYFVLNTLQSRGGKAVSLRVSGDKAAFHDCTILSYLDTLLDYTGLHYYRNCYIEGATDFICGDASSLFEASEIYLCWLHFCFTEEYEKLR SSNGSITAHDRDSESDRTGYIFFRCK | |||
| Full Sequence |
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| Protein Sequence Length: 290 Download |
| MLAVLFSSNT GNPHVVAYFD ERHDASDASP TPPPKDWPVA NLIRVDNSAL GRGDFKTIQE 60 AIDSVPSNSS ELVFIWVRTT PSLRGARFES ATLSVLAPYF VLNTLQSRGG KAVSLRVSGD 120 KAAFHDCTIL SYLDTLLDYT GLHYYRNCYI EGATDFICGD ASSLFEASEI YLCWLHFCFT 180 EEYEKLRSSN GSITAHDRDS ESDRTGYIFF RCKCILYGTV FYGEYKNYGP EADRWKRAAW 240 SKKLAIDEVS PLVSKEMIGG RSRIRAKPKF LRIGSTIFKA GTHGIPSMT* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02671 | PLN02671 | 5.0e-32 | 36 | 265 | 320 | + pectinesterase | ||
| PLN02480 | PLN02480 | 5.0e-38 | 51 | 262 | 297 | + Probable pectinesterase | ||
| PLN02682 | PLN02682 | 8.0e-40 | 51 | 260 | 299 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 2.0e-42 | 40 | 270 | 314 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 2.0e-75 | 31 | 265 | 309 | + putative pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN79458.1 | 0 | 28 | 278 | 31 | 339 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI37658.1 | 0 | 28 | 284 | 49 | 363 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002280496.1 | 0 | 39 | 284 | 3 | 306 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305435.1 | 0 | 36 | 272 | 20 | 315 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512914.1 | 0 | 36 | 272 | 37 | 331 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0.00000000001 | 48 | 171 | 12 | 173 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0.00000000001 | 51 | 266 | 11 | 306 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 0.000002 | 111 | 170 | 129 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 0.000002 | 111 | 170 | 129 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 0.000002 | 111 | 170 | 129 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| DR952425 | 225 | 34 | 225 | 1.99965e-42 |
| AJ795739 | 214 | 34 | 213 | 6.99949e-42 |
| AM721699 | 223 | 34 | 223 | 2e-37 |
| AM722128 | 224 | 34 | 224 | 7e-37 |
| FC069528 | 176 | 34 | 176 | 2e-35 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Linum usitatissimum | Lus10000045 | ||||
| Populus trichocarpa | Potri.009G117700.1 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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